Prunus persica (peach): 18776712
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Entry
18776712 CDS
T03092
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18776712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18776712
03012 Translation factors [BR:
pper03012
]
18776712
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18776712
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
18776712
Translation factors [BR:
pper03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
18776712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
AAA_19
T2SSE
nSTAND3
ATPase
Dicer_dimer
AAA_30
AAA_16
Myosin_head
PhoH
Motif
Other DBs
NCBI-GeneID:
18776712
NCBI-ProteinID:
XP_007209071
UniProt:
M5WU17
LinkDB
All DBs
Position
G5:17479565..17489022
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AA seq
1230 aa
AA seq
DB search
MPYSALFEGYIIRTTAMSLKPTTASSPILASLRRTHNHRHRHIASVRPSFFGCTMRNSRY
HTHCLARSQNWNACYYLPRHVGPVGEVTCLASSRAVEADWKQRQLRSTAVPFLYQQNLGY
GRFAYQDASASEDSDYERSSSPRQSGGSTLENIDEWRWKLTMFLRNKDEQEVVSRERKDR
RDFEHLSELANRMGLYSRQYSKVVVFSKVPQPNYRPDLDDKRPQREVVLPFGLHREVDAH
LKAYVSQKPMKTGNLSEFSFSRSSSSVSMVNDGGPYEQEEPSIQNSDAMEKILLRKSLQL
RNRQQHWQESPEGQKMLELRRSLPAYKEKDALLKAISENQVIVVSGETGCGKTTQLPQYI
LESEIEAARGTACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGVKGRDTRL
LFCTTGILLRRLLVDRKLRGVTHVIVDEIHERGMNEDFLLIVLKELLPRRPELRLILMSA
TLNAELFSSYFGGAPMIHIPGFTYPVRAHFLENILEMTRYQLNEYNQIDDYGQEKAWKMQ
KQAPGFKKRKSQIASTVEEVLEAADFREYSPRTRESLSCWNPDSIGFNLIEHLLCHIVRK
ERPGAILVFMTGWDDINSLKDQLQSHPLLGDPSRVLLLACHGSMPSSEQRLIFDKPEDEI
RKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAASRQRRGRAG
RVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSKALQAPEP
LSVQNAVEYLKIIGALDDNEDLTVLGRHLSMLPVEPKLGKMLILGAIFNCLDPVMTAVAG
LSMRDPFLMPFDKKDLAESAKAQFSARDNSDHLALVRAYDGWKNAERVQSGYEYCWRNFL
SAQTLKSIDSLRKQFFFLLKDTGLVDHHTETCNTWSHDEHLVRAVICAGLFPGICSVVNK
EKSIALKTMEDGQVMLYSNSVNAGVPKIPYPWLVFNEKVKVNSVFLRDSTGVSDSVLLLF
GGNISRGGLDGHLKMLGGYLEFFMNPALANTYIFLKGELGELIHNKLLNPKLDMQSHTHL
LSALRLLVSEDQCEGRFVFGRKVPVPSKKATKEIKPSILSVGDKGGPNNNSKNQLQTLLV
RAGHDAPTYKTKQLKNNQFCSTVIFNGLNFVGQPCNSKKQAEKDAAAEAVLWLKGERHSS
STDIDHMSMLLKKSKKTSQKRTSFDSAKWG
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgccctactcagccctctttgagggctatattataagaacaaccgccatgtctctcaaa
ccgaccaccgcctcatcccccattttggcctctttgcgtaggacccacaaccaccgccac
cgccacatagcttcagtaaggccgtcttttttcggttgcaccatgaggaacagccgttac
cacacccactgccttgcccggtcgcagaattggaatgcgtgttattatctgccgcgtcac
gtggggccagtgggggaagtcacgtgcctggcctcgtcgcgggcggtggaggctgattgg
aagcagaggcagctgaggagtacggcggtgccctttttgtaccagcagaacttgggttat
ggacggtttgcataccaagacgcctccgctagtgaggattccgactacgaaaggagttct
tctccgcgccaatcgggtggttcgacccttgaaaacattgatgaatggagatggaagtta
accatgtttcttcgcaacaaagatgagcaagaagtggtgtccagggaaagaaaggacaga
cgtgattttgagcatctttcagaactggcaaataggatgggtttatatagccgtcagtat
tcaaaagttgtagtctttagtaaagtccctcagccaaattacagacctgatctggatgat
aagcgaccacaaagagaggttgtcttaccttttggactgcatagagaagtagatgctcat
ctcaaagcctatgtatctcaaaagccaatgaagacaggaaatttatcagaattttccttt
tcaagatcaagcagtagtgtaagtatggttaatgatggaggaccttatgagcaggaggag
ccctcaatacagaatagtgatgccatggagaaaattcttctgcggaaaagcttgcaactt
cgtaataggcaacaacattggcaggaatctcctgaaggtcaaaagatgcttgaacttcgt
agaagcctgcctgcatataaggaaaaagatgcactgttaaaagccatatcagaaaatcag
gtcatagttgtctcaggtgaaacaggttgtggtaaaactacacagcttcctcagtacatt
ttagaatctgagattgaagctgctcgaggaactgcctgcagtattatttgtacccagcct
aggcgaatatctgccatggctgtttctgaaagagttgctgcagagcgaggggagaaactg
ggtgaatctgttggctacaaagttaggctggaaggggtgaaggggagggacacccgcctt
cttttttgcaccactggaatattattgaggcgattacttgtcgacagaaagttgagaggt
gttacacatgttattgttgacgagattcatgaacgtggaatgaatgaagattttcttctt
atcgtcctgaaagaacttctccctcgtcgaccagagttgaggttgattttgatgagtgca
accctaaatgccgagcttttctcttcctactttggtggtgctccaatgattcatattcct
ggttttacatatccagtccgagcacattttctggagaatattctagaaatgactaggtat
cagttgaatgaatacaatcaaattgatgattatggtcaagaaaaggcatggaaaatgcag
aaacaagctccaggtttcaaaaagaggaaaagccaaattgcttctacagttgaggaggta
cttgaagctgctgattttagggagtacagtccaaggactcgagagtctctctcctgttgg
aatcctgattccattggtttcaacctcattgagcatctgctttgtcacatagtcaggaaa
gaacggcctggtgctattttggtttttatgactggttgggatgacattaattccttgaag
gatcaactccaatctcatcccctattaggagatcctagcagggtcctactgcttgcatgt
catggttctatgcctagctctgagcagaggttaatatttgataagccagaagatgaaatt
cggaaaatagttctagcgacaaacatggctgagactagtatcactatcaatgatgttgtt
tttgtggttgattgtggaaaggcgaaagagacatcatatgatgcacttaataacactccc
tgtttgcttccatcctggatttcaaaggctgcttctcggcaaagaagaggcagagctggt
cgtgttcaacctggtgagtgttaccatctctaccccagatgtgtatatgatgcctttgct
gattatcagttacctgaacttttgaggacgccattgcaatctttatgtttacaaatcaaa
agtctgcaacttggaagtatttcagagttcctatctaaggccttacaggcgccagaacct
ctatcggttcaaaatgctgttgagtatttgaagatcattggggccttagatgataatgaa
gatctgacagtgttaggacgccacctgtcaatgcttcccgttgagcctaaacttggaaaa
atgctcatattaggagctatcttcaactgtctggatccagtaatgactgctgttgcaggc
cttagtatgagagatccattcctgatgccatttgacaaaaaggatcttgcagaatcagca
aaagcacagttctccgcccgtgataacagtgatcatcttgctcttgtccgagcttatgat
ggttggaaaaatgctgaaagagtgcagtctggttatgagtactgctggaggaattttctt
tctgcacaaactctaaaatccattgactctcttcggaagcagttcttctttttgctcaag
gatactggtctggttgatcatcatacagaaacttgtaatacatggagccatgatgaacac
cttgtccgagcggtcatctgtgccggattatttcctggaatatgctctgttgtgaacaaa
gagaagtcgattgcgctgaaaacaatggaagatggacaagtaatgctatactcgaattct
gtcaatgccggggtacccaaaattccatacccatggctagttttcaacgaaaaggtgaaa
gtgaattcggtatttctccgggattcaactggtgtatctgattctgtactccttttgttt
ggaggcaacatctccaggggcgggctggatgggcacctgaagatgttgggaggatatttg
gagtttttcatgaatcctgcattagcaaatacatatattttcttaaagggggagcttggc
gaactgattcataataagctcctcaaccccaaattggatatgcagtctcatactcacctc
ctatcagcactaagattactggtctcagaggaccaatgtgagggtagatttgtctttggc
cgcaaggtgccagtaccttcaaagaaggcaacaaaagagattaaacctagcatcttgtcg
gttggtgacaaaggtgggccaaataataattccaaaaatcagctgcaaactttgcttgtc
agagccggacatgatgcacccacctacaagacgaaacaattgaaaaacaaccagttctgt
tctacagtgatatttaatgggttgaactttgtagggcagccttgcaatagtaagaaacaa
gcagagaaggatgcagctgctgaggctgtgctttggttgaagggtgagaggcattcatct
tccacagatattgaccatatgtcaatgcttctaaagaagagtaaaaagacaagccagaaa
aggacttcatttgatagtgctaagtggggttaa
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