Prunus persica (peach): 18776754
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Entry
18776754 CDS
T03092
Name
(RefSeq) cleavage stimulation factor subunit 50 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18776754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18776754
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
18776754
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
LisH_CTF50
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
ASA1
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_Aladin
Beta-prop_SCAP
CFAP251_N
Cytochrom_D1
DSE1_N
Beta-prop_WDR41
Ge1_WD40
PAC11
Beta-prop_VPS8
Beta-prop_BBS7
KNTC1_N
TPM_phosphatase
Motif
Other DBs
NCBI-GeneID:
18776754
NCBI-ProteinID:
XP_020420455
LinkDB
All DBs
Position
G5:complement(16561916..16567089)
Genome browser
AA seq
465 aa
AA seq
DB search
MENSSLEQVLQDAKLHRQINSLIVAHLRDNNLYQAASVVASATMTSLNDEAPPNKLLELV
AKGLAVEKDEMLRGVPSSAFDLGTSIPSGYGSIPAPRTAAVDFGAVQETKGSSKSFPKHE
TRHLSEHKNIARCARFSPDGKFVATGSSDTSIKLFEVAKIKQMMLPDARDARDGPVRPVI
RTFYDHLQPINDLDFHPQNTVLISGSKDNTINKTCLHAPLILPFLVLCCFFSSSPSNITS
ISCKTKQEFTSNSYDTHNVRSVSFHPSGDFLLAGTDHPIPHLYDINTFQCYLSANAPEIN
DNGAINQVRYSATGGMYVTASKDGTIRLWDGVTANCVRSIAGAHGTAEATSANFTKDQRF
VLSSGKDSTVKLWEVGTGKLVKQYLGATHTQLRCQAVFNDTEEFVLSIDEPTNEIVIWDA
LTAEKVAKWPSNHIGAFRWLEHSPTEAAYVTCGTDRSIRFWKESL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcagcttggagcaggttctgcaagatgccaagctccacagacaaatcaat
tcgctcatcgtcgctcatcttcgcgacaacaatctctatcaggctgctagtgtcgttgct
tccgcaacaatgacatcattgaatgatgaagccccgcctaataagctccttgaactggtt
gccaagggccttgcagtggagaaagatgagatgttgagaggggttccgtcatctgcattt
gatttgggtacatcaataccttctggatatggttcaatcccagctcctcgcactgctgct
gttgattttggtgcagtgcaggaaacaaaaggctcatcaaagagcttcccaaagcatgag
acacgccatctttcagagcacaagaatattgccagatgtgcaaggtttagtcctgatggg
aagtttgttgctactggaagttctgacacatcaataaagctttttgaggttgcaaaaatt
aagcaaatgatgcttccagatgcaagagatgcaagagatggtcctgttagacctgtcatt
cgcacattctatgaccacttacaacctataaatgacttggatttccatcctcagaacact
gttcttatatcggggtcaaaagataacaccataaacaaaacatgtcttcatgcccctctt
attctgccctttttagttctttgctgttttttttcctcctcaccttcgaacattaccagc
attagttgtaaaacaaaacaggagttcacttcaaactcttatgatacacacaatgtgcgt
tcagtatcttttcatccttctggagattttcttctagctgggactgatcatccaattcca
cacttgtatgatatcaataccttccagtgctacctgtctgcaaatgccccagaaatcaat
gataacggagccataaatcaggtcaggtattctgctacaggtggcatgtatgttacagct
tctaaagatggtaccattcgtttatgggatggtgtaactgccaattgcgtacgctcaata
gctggtgcacatggcacggcggaggcaaccagtgcaaactttactaaggatcaaaggttt
gttctctcttctggaaaggattctactgtaaagctttgggaagtcggcactggaaaattg
gttaaacaatatctaggagctacacatactcaattgcggtgtcaggctgtttttaacgat
accgaagaatttgtactctccatcgatgaaccgaccaatgagattgttatatgggatgct
ctgacagcagagaaagtagcaaaatggccttccaatcatattggtgctttccgttggctt
gagcactcaccaacagaggcagcatatgttacctgtgggactgacagatcaatccggttc
tggaaggaaagtctgtaa
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