Prunus persica (peach): 18776849
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Entry
18776849 CDS
T03092
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-3 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pper
Prunus persica (peach)
Pathway
pper03022
Basal transcription factors
pper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18776849
09124 Replication and repair
03420 Nucleotide excision repair
18776849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18776849
03400 DNA repair and recombination proteins [BR:
pper03400
]
18776849
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
18776849
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
18776849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
18776849
NCBI-ProteinID:
XP_007209600
UniProt:
M5WAQ1
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All DBs
Position
G5:complement(5006342..5012973)
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AA seq
428 aa
AA seq
DB search
MSWCMQLVKRANYKATVRDPGALGVLTMTENKFVFSPNVHMSTAAKPALDVEFKQITCLK
NTKEGGDRPPWLRLSEKDKTYIFEFASFRDLHVCREFAANALAKRGEAAIPPCSSDEQIC
TAEIMHRMKLLQESSELHKLHMQYVMSGVLTEAEFWAARNQFGDVDSRPKPKQRVGFRNS
MIMDTKPMTDGRTNKVTFSLTAEIKYQIFALKPAVQQAFLALVPSKTTEKNFWTKYFRAE
YLRSTGNAAAAEAEAADDEELAMFLKEDEVLAREARRKLRRVDPTLDMEADQGDDYTHLP
DHGIFFRDEVYSRRSTLSQDLNRQGAVVLQGRSIVEVDESGVQGGFGRIARTTEMEDLQE
PHHLHVAQLLCMKDPGDYFDTQQANNAVKTEEAYGSLRQSISKIKSIGLGNSTVAAEIAL
TIFNATSF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtgtatgcaactggtgaagcgtgctaattacaaggctacagtgagagatcct
ggggctcttggggttttaactatgacggagaacaagtttgtgttcagcccaaacgttcac
atgtccaccgccgcgaaaccggcgctcgatgtggagttcaaacaaattacatgtctcaaa
aacactaaggagggaggagatagaccaccttggcttcgtctcagtgagaaggacaaaact
tacatctttgagtttgcaagttttcgtgatcttcatgtatgccgagagtttgcagccaat
gcgcttgctaagcgtggagaagctgcaatacctccttgttcttctgatgaacaaatctgt
acagcagaaataatgcaccgtatgaagttattacaagaaagcagtgagttgcacaaactt
catatgcagtatgtaatgagtggtgtcctaactgaagctgagttctgggcagctaggaac
cagtttggtgatgtagatagccgtccaaagccaaagcaacgggttggtttcagaaactca
atgataatggacaccaaacccatgacggatggccggacaaacaaggttacttttagtttg
actgcagagattaagtatcagatttttgccctgaaaccagctgttcagcaggcatttctt
gctctggttcccagtaagactacggaaaaaaacttttggacgaagtatttccgagctgaa
tacctccgaagcacaggaaatgctgctgcagctgaagcagaagccgccgatgatgaggaa
ctggcaatgtttttgaaggaggatgaggtattggcaagggaagctcgtcgaaagcttcga
cgggttgatccaactttggacatggaagctgaccaaggagatgattatacgcaccttcca
gatcatgggatattctttcgggatgaggtgtacagcaggagaagtactttatcacaagac
cttaaccggcaaggtgctgttgttcttcaaggaagaagcatcgtcgaagttgatgagagt
ggtgtgcaggggggatttggtaggattgctcggacgactgagatggaggatcttcaagaa
cctcaccatcttcatgttgctcaattattatgcatgaaggatcctggagactactttgac
acgcaacaagctaataatgcagttaaaactgaggaagcatacggctccttgaggcagtct
atatctaaaatcaagagcattggattgggaaattccacagttgcagcagaaattgctctt
acgatttttaatgcaacatcattttag
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