Prunus persica (peach): 18777016
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Entry
18777016 CDS
T03092
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
pper
Prunus persica (peach)
Pathway
pper03030
DNA replication
pper03420
Nucleotide excision repair
pper03430
Mismatch repair
pper03440
Homologous recombination
pper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18777016
03420 Nucleotide excision repair
18777016
03430 Mismatch repair
18777016
03440 Homologous recombination
18777016
03460 Fanconi anemia pathway
18777016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pper03000
]
18777016
03032 DNA replication proteins [BR:
pper03032
]
18777016
03400 DNA repair and recombination proteins [BR:
pper03400
]
18777016
Transcription factors [BR:
pper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18777016
DNA replication proteins [BR:
pper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
18777016
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
18777016
MMR (mismatch excision repair)
18777016
DSBR (double strand breaks repair)
HR (homologous recombination)
18777016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
RADX
CDC24_OB3
zf-CCHC_3
DUF223
zf-CCHC_5
DUF6558_C
Motif
Other DBs
NCBI-GeneID:
18777016
NCBI-ProteinID:
XP_020419104
LinkDB
All DBs
Position
G5:2264175..2267987
Genome browser
AA seq
873 aa
AA seq
DB search
MAVKLTEGAIMKICTGEYHDETWKPILQVLDVRMVNTARSGAQPGPDNERYRVLISDGSH
HQQGMLGTQKNTLVQQGLLQKGSIVCLKQFTCTQVQNRLIIIIIELDLVLDKCDLIGEPV
AGPKYLNAQSSGALPGNAQSIGGSAHSGGAVHQTVTKATLEQPRVNQSFGSAYSGGSDPG
RHATMSTTPNHPKPEPGFGFPGSAPLSGSYSNQNTGFRSPRPEVPQPTLNAYARPPQPTY
QQPSPTYPNRGPVAKNEAPPRIMPIAALNPYQGRWTIKARVTAKGELRHYSNPRGDGKVF
SFDVLDSHGGEIRATCFNAVADQFYNQIEVGKIYLISKGSLKAAQKAFNNLNNDHEITLD
HASIIQPCFEDDDSIPKQNFHFCRISDVEGLNNNSIVDVIGVVSSINPPASILRKNGVET
QKRSLQLKDMSGRSVEVTLWGNLCNAEGQRLQSMCDSGAFPVLAVKGAKVNDFNGKAVGT
IPSSQLFIEPNIEEAREMRSWFDKEGRNTSCIPISRETAGVGRTDIRKTISQIKDERLGT
SEKPDWITVSGTVSFIKVDSFCYSACPLMNGDRQCSKKVTNNGDGKWRCDRCDQSMEECD
YRYLLQLQIQDHTGTTWVTAFQEGGEEIMGIPAKDLYFLKYEEQDDEKFVEITRKVLFTK
FNFKLKIKEEIYGDEQRVKSTVLKAEKVNFSSEARVHLELMNKLKMETISSSASEGDNVM
PSAGMNATGVGNTASRQPTLDVNVGYNNNAGREFGGPESQGVTYRNQFSSARSPSTGSVG
SYLSCNSCGDAGHSSMNCPSVMNGPGQSSGAGYNNRVSSRPGVGNTSGDCYKCHQPGHWA
RDCPGLNTTPAYGGSGGNPVRYGGVANQRVGGF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaagctaacagagggtgcgataatgaagatttgcacaggggagtaccatgac
gagacctggaagcccatcttgcaagtgctcgacgtgaggatggtcaatacagcgcgcagt
ggggcccagccgggccccgataacgagagatacagggttttgatctcggatggttcccac
caccagcaggggatgctgggcacccagaagaacacactggttcagcaaggcctacttcag
aagggctccatcgtttgcttgaagcaattcacctgtacccaagtccaaaaccgcctgatc
atcattataattgaattggatttggtgcttgataaatgtgatctcattggagagcctgta
gcaggacctaaatatctgaatgcacagtcctcaggggcattacctggaaatgcccaatct
attggtggcagtgcacattctggtggtgcagttcatcaaactgtgactaaagctactctg
gaacaacctagagtaaatcaatcatttggtagtgcttattctggtggttctgacccagga
agacatgcgacaatgagtaccactcccaatcaccctaaaccagagcctggttttggtttt
cctggatcagcaccattaagtgggtcatatagcaatcagaacacaggttttcgcagccct
agacctgaggttccacagccaactctaaatgcttatgctcggccgcctcagccaacttat
caacagccatctccaacgtatcctaatagaggaccagttgccaaaaatgaagcccctcct
agaataatgccaattgctgctctgaatccataccaagggcggtggacaatcaaggctaga
gtgacagctaaaggagaacttaggcactatagcaatcctcgtggtgatgggaaagttttt
tcttttgatgttcttgattctcatggtggagaaattcgagcaacctgttttaacgctgtg
gctgatcaattctacaaccagattgaagttggcaagatttatttgatctccaagggtagt
ttaaaagcagcccaaaaggctttcaacaacctcaacaatgaccatgaaattactttagat
cacgcatcgataatacagccatgttttgaggatgacgactcaattccaaagcagaatttc
catttctgtcgtataagtgatgttgaaggcttgaacaacaactctattgtcgatgtaata
ggtgtggtatcctccatcaatccccctgcttctatactgaggaaaaatggtgttgagact
cagaagagatccctccagttgaaggatatgtctggtcgtagtgtcgaggtaactctatgg
ggaaatttgtgcaatgcagagggacaaagactgcaaagtatgtgtgattctggtgcattc
ccagtgctggctgtaaaaggtgctaaagttaatgatttcaatgggaaggcggtagggacc
attcctagtagtcagctttttatagagccgaatattgaagaggcacgtgagatgaggagt
tggtttgacaaggaaggaagaaatacctcatgtatccctatttccagggaaacagcaggt
gtgggtagaacagatatccgaaagactatatctcaaattaaagatgagcggctggggact
tccgagaagccagactggatcacagttagtggaactgtttcctttataaaggttgatagt
ttctgctattcggcatgcccgctcatgaatggtgatcgacaatgcagcaaaaaagttaca
aataatggagatggcaaatggaggtgcgatagatgtgatcagtccatggaagaatgtgac
tacagatatttactccagttacagatacaggatcatactggcacaacatgggtaacggca
tttcaggagggtggtgaagaaatcatgggtatacctgcaaaagatttgtattttttgaaa
tatgaagagcaagatgatgagaagtttgtagaaatcactcggaaggttctctttactaaa
ttcaatttcaagttgaaaataaaggaggagatttatggtgatgaacaacgtgtaaaatca
actgttttgaaagcagagaaggtgaacttttcatcggaggctagagttcatttggaattg
atgaataaacttaagatggagactattagttcttctgcctccgagggggataatgtaatg
cccagcgctggaatgaatgctactggagttgggaacactgcaagtagacaacctacacta
gatgtgaatgttggttacaacaacaatgctggtagagaatttggaggaccagaaagtcaa
ggggttacctatcgaaaccagtttagtagcgctaggtctccttcaactggctctgtcggt
tcatatctgagctgtaacagttgtggggatgctggccatagctccatgaactgcccaagt
gtaatgaatggcccagggcagtcatcaggagcgggctataacaacagagtatcttctagg
ccaggtgttggcaatacttctggtgactgctacaaatgccaccaacctggacactgggca
agagactgtcccggcttgaacactactccagcgtatggaggcagcggagggaaccctgtg
agatacggaggtgttgcaaaccaaagggtcggtggcttttga
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