Prunus persica (peach): 18777066
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Entry
18777066 CDS
T03092
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pper
Prunus persica (peach)
Pathway
pper03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
18777066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18777066
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
18777066
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
18777066
NCBI-ProteinID:
XP_007209075
UniProt:
M5W984
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All DBs
Position
G5:17031885..17038350
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AA seq
942 aa
AA seq
DB search
MDANFEDQSKLPELKLDAKQSQGFLSFFKTLPHDPRPIRLFDRRDYYTAHGENATFIAKT
YYRTTTALRQLGSGLDGLSSVSVSKNMFETIARDLLLERTDHTLEIYEGSGSSWRLVKSG
TPGNLGSFEDVLFANNDMQDTPVVVALLPNFRENGCTVGLGYVDLTKRVLGLAEFLDDSH
FTNVESALVALGCKECLLPLESGKTSEIRTLHDALNRCGVMLTERKKAEFKMRDLVQDLS
RLVKGSIEPVRDLVSGFEFAAGALGALLSYAELLGDESNYGNYSIQRYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINSRLDLVQAF
VEDPALRQDLRQHLKRISDIERLMHNLEKKRAGLQHIVKLYQSSIRLPYIKSALERYDGE
FSSLIKERYWDPLELWTDDGHLNKFVALVESAVDLDQLENGEYMISSTYDPALSALKDEQ
ESLEHRIHNLHKETAKDLDLALDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQRIVEEYKNCQKELVNRVVQTTATFSEVFWSVAGLLSELD
VLLSFSDLASSCPTAYTRPIITPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALAHENSVHEANMKQIVGVANYHVSAHIDSSSHKLTMLYKVEPGACDQSFGIQVA
EFANFPESVVSLAREKAAELEDFSATAVIPNDAIEEVGSKRKREYDSDDMSRGSARAHEF
LKEFSNLPLETMDLKEALQKVSKMKNDLQKDAVNSHWLQQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaattttgaggatcagagcaagcttcctgagctcaaattagatgccaagcaa
tctcaagggtttctctcatttttcaaaaccctcccccatgacccaagacctatccgattg
tttgatcgtcgggactactatactgcccatggtgaaaatgctactttcattgcaaagacc
tactatcgtaccactactgctttgcggcagttgggtagcggattggatggcttatccagt
gtcagcgttagtaaaaacatgtttgagacaattgcccgtgatctactactggaaagaaca
gaccacactcttgagatttatgagggtagtggctcaagttggaggctggtgaaaagtgga
acccctggaaatctcggcagttttgaagatgttttgtttgccaacaatgatatgcaggat
accccagtggttgttgcactattacctaactttcgtgaaaatggttgcacagttgggtta
ggatatgttgatctaactaaacgagtacttggattagctgaatttcttgatgatagccac
tttacaaatgtggaatcagctctagtcgcacttggttgcaaggaatgccttctgccccta
gagagtggcaaaacaagtgaaattagaacattgcatgatgcattgaatagatgtggtgtg
atgttaactgagaggaagaaggctgaatttaagatgagagatttggttcaggatctcagt
cggcttgtcaaaggctctattgaaccagttcgagatttagtttcagggtttgagtttgca
gctggagctttgggggcattgctctcttatgcagagttacttggtgatgagagcaattat
ggaaattatagtattcaaagatataatctagacagctatatgaggttagattctgcggca
atgagggcacttaatgtcctggaaagcaaaactgatgcaaacaaaaatttcagtttgttt
ggtcttatgaatagaacttgtactgctggaatgggtaaacgattactgcacatgtggtta
aaacagcctttattagatgtagatgaaatcaattcgaggctagatttggtacaagcattt
gtggaggatcctgcacttcgccaagatttgaggcagcatctgaaaagaatctcagacatc
gagcgactgatgcacaatcttgagaagaaaagagctggtttgcagcatattgtaaaactt
tatcagtcaagtataagacttccatacattaaaagtgccctagaacgctatgatggagaa
ttttcctcactgatcaaggaaaggtattgggatccccttgagttatggactgatgatggt
cacttaaataagttcgttgctctagtggaatctgctgttgaccttgatcaacttgagaat
ggagagtacatgatatcatctacttatgaccctgcactttctgcactaaaagatgagcaa
gagtcgctggagcaccgaatacacaatttgcataaagaaactgctaaagatcttgatctc
gctctagacaaggctttgaaattagataaaggcacacaatttggacatgtcttcagaatc
acaaagaaggaagagccaaaaataaggaaaaagctcacaacgcaattcattgttctggaa
acccgaaaggatggagtgaaatttaccaacacaaagcttaaaaagttaggggatcagtat
caaagaatagttgaagagtataagaattgtcagaaagagctggttaaccgagttgttcaa
actacagcaactttctctgaggtgttctggtctgtagctgggttgctttctgaattggat
gtcttacttagtttttctgatttggcttctagctgtcctactgcttacacaaggccaatc
atcactccatcggatgagggggatattatattagaagggagtagacatccttgtgtggag
gctcaggactgggtaaattttatacccaatgattgtaaacttgtgagaggaaagagttgg
ttccaaatcattacagggcccaatatgggtggaaaatctacatttatccgacaggtcggt
gtgaatattctaatggcacaagttggttcttttgttccttgtgacaaagctagcatttct
attcgtgattgcatttttgctcgcgtgggtgctggtgactgccaactacgcggagtttct
accttcatgcaagaaatgcttgagaccgcatctatactgaaaggagctacagataagtca
ctgataatcatcgacgagttaggccgagggacatcgacttatgatggattcggtttagct
tgggccatttgtgagcaccttgttgaagtgattaaagcacctaccttgttcgcaacccat
tttcatgaattgactgcattagctcatgaaaatagtgttcatgaggccaatatgaagcaa
attgttggtgtagcaaactatcatgttagtgcacatattgactcatcaagccacaagttg
actatgctgtacaaggttgagccaggggcttgtgatcaaagttttggtattcaggttgca
gaattcgcaaactttcctgaaagtgttgtttcccttgctagagagaaggctgctgaattg
gaggatttttcagctactgcagttattccaaatgatgctatagaagaggttggatccaag
cgcaagagagagtatgactctgatgatatgtctagaggatccgctcgggcacacgaattt
ctgaaggagttttctaatttgccattggaaacaatggatttaaaggaggctttgcaaaag
gttagcaagatgaagaatgacttgcaaaaggatgcagtaaattcccactggctccagcaa
tttttctag
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