Prunus persica (peach): 18777274
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Entry
18777274 CDS
T03092
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pper
Prunus persica (peach)
Pathway
pper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18777274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18777274
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
18777274
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18777274
NCBI-ProteinID:
XP_007211028
UniProt:
M5WEM0
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Position
G5:5663611..5668786
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AA seq
1259 aa
AA seq
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MDYNAPVARRTRLSEEKYWRKIWEKQGGKRKLRDGSDKKEKSRKGSKEWDCVSLDDSEEN
EEASVSPSVGGKDKKKSGKRKLHDGPNMKEKSRKGSKEWDCIYVDDSEENEEVSVSPSTK
GKNKKKGGKRKSAEGSKKQRSGYDDSDDSVAASVEILSESSFGKQDNDSVGFDHVESAGS
NGKNSKSGAVDIENLCPVDVEDSDGEVVYLGEEKVGGFGCSSTERSDASEDTASDGSDES
WKSSSSEDAISDASDESEDESFEQEKSESSVFSEESNSCSGEGHDDEREVIKTSGKPRKG
TSVEGDVEVKKGKDIDASEITKGSGKAGKGRSVEVGVRRKRRVGLDMSVDADDDIDSNKD
DPIHSAQEFNSVAKRNRSRVSGRSEKKRMVNQRLCVDEDNEDSSSGHDNDNEDVDDANCS
GPRTRCHKKKTGTDDDDRRNYESDKTYGGPSKWNGVHGVCKKNKRDIENLTNRMSMRAKK
DCNAFKILVDSIYEKGEGTLEGSVSFGDEGPKDERNPPESEMTTLPLKFTFPWEQSNVPK
KSECDPEEKELWDDLEFALRASEIESPDSNVVENQDSLPIANEVETVASLCRRGVHQLIL
DEEIGLLCKFCSYIDQEIKYILPDFLDCPYGRFDKRGSETDNRSIFDELQSHVSDSDRHS
GCNSHPHVEGTVWDLIPGVKSSMYPHQREGFEFIWNHIAGGIHLDKLKKPSSVGGNGCII
SHAPGTGKTRLTIVFLQTYMELFPDCRPLLIAPRSMLLTWEEEFKKWKFDITFHNLNNLE
LSGEENQTAVNLVMQAQGRRSVNKENRRMLKLYSWKKNRSILGITYRLFEQLSGAQKTGS
VDEMGKILLEFPGLVVFDEGHTPRNDQSHMWKALSEIKTKSRILLSGTPFQNNFQELFNT
ICIVRPTFAASIDSTKFNKDLPKKRGRKSNGEKSKWTFVASSSGKVADDKEKHATEVKAR
IAPFVHVYKGSVLQDSLPGLRNSIVVLHPTPLQVKFHKRIQGVKELFRYENLEALICIHP
SLLLKDKEDAFSADRGRLEELKLNPDAGVKAKFVMELIRLSDAMKERVLVFSQYLDPLIL
IRDLLKSLFQWTEGEEVLYMDGKCDMKQRQSSMKVFNDPSSNAKVLLASTKACSEGISLV
GASRVVLLDVAWNPSVERQAISRAYRLGQKKVVFVYHLLMDGANEEDKYSRQVDKSRLSE
LVFSDSDKKALEKEIRATVSEDKILEEMAQHEKLKHIFKSIALLHEDIYFEQLGQSTFG
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggactataacgcgcctgtagcaaggaggacacggctaagtgaggagaaatactggagg
aagatatgggagaaacagggtgggaaacgaaaactccgtgatgggtctgataaaaaagag
aaatcacgtaaggggtccaaggaatgggattgtgtctctctggatgactctgaggagaat
gaggaagccagtgtgagtccttctgtgggaggcaaggacaagaagaagagtgggaaaaga
aaactccatgatgggcccaatatgaaagagaaatcacgcaagggatccaaggaatgggac
tgtatttatgttgatgactctgaggagaatgaggaagtcagtgtgagtccatccacaaaa
ggcaagaacaagaagaagggtgggaaaagaaaatctgctgaggggtctaagaaacagagg
tccggttatgatgattctgatgacagtgtagcggccagtgtggagatcctcagtgaaagt
tcatttggaaagcaagacaatgattctgtgggttttgatcatgttgagagtgccggatca
aatggaaagaattctaaatctggtgctgtggacattgagaatttgtgtccagttgacgtg
gaggatagtgatggtgaggtggtgtatttgggtgaagagaaagtaggaggttttggttgt
tcgagtacagagaggagtgatgccagtgaggatactgcttctgatggctcagatgaatct
tggaagagtagttctagtgaggatgctatttctgatgcctcagatgaatcagaagatgag
tcttttgaacaagaaaagtcagaaagttctgtattttctgaggagtcgaattcatgcagt
ggagaggggcatgatgatgaaagagaggttatcaagacaagtgggaaaccaagaaagggg
acaagtgttgagggtgatgttgaggtgaagaaggggaaggacattgatgctagtgagatt
acaaaaggaagtgggaaagcgggaaagggaagaagtgttgaggttggtgtgaggagaaag
agaagggttgggttggatatgtcagttgatgcagatgatgacattgatagcaacaaagat
gatcctattcattccgcacaagagtttaatagtgtggcaaaacgaaatcgttcacgagtt
agtggaagaagtgaaaagaagagaatggtaaatcaacgactttgtgttgatgaggataat
gaggattcttcttccgggcatgataatgacaatgaggatgttgatgacgccaattgcagt
ggtccaagaactaggtgccacaaaaagaaaacagggactgatgatgatgatagaagaaat
tatgaaagtgacaagacctatggtggtcctagtaaatggaacggtgtccacggagtgtgc
aagaagaataaaagggatatcgagaatctgactaacagaatgtccatgcgggcaaagaag
gactgtaatgcttttaagattcttgtagattccatttatgagaagggagaagggacactg
gaagggtcagtttcctttggagatgaaggccctaaagatgaaagaaatccaccagaatct
gagatgacaactcttccacttaagtttacttttccatgggagcagtcaaatgtaccaaag
aagtcagagtgtgatccagaagaaaaagaactatgggacgatcttgaatttgctctcaga
gcttctgagattgagtcccctgattctaatgtggttgaaaatcaagattcactccctatt
gctaacgaagttgaaacagtagctagcctctgtaggagaggggttcatcagcttatactt
gatgaagagattggactcctatgcaagttttgctcttatatagatcaggagatcaagtat
attttaccagactttcttgactgcccttatggaagatttgacaaaagaggctccgaaaca
gacaaccggtctatctttgatgagcttcaatcccatgtttctgattctgatcgccattct
ggctgtaattctcatcctcacgttgaaggcacagtgtgggacttaattcctggtgttaaa
agtagtatgtatccccatcagcgtgaaggttttgagtttatctggaaccatatagcgggt
ggtattcatcttgacaagttgaaaaagccaagtagtgttggtgggaatggatgcatcata
tcacatgctcctggaacaggaaaaactcgcctgaccattgtctttctccagacatacatg
gagttattcccagattgcaggccgcttctgattgctcctcgtagcatgctccttacgtgg
gaagaggagtttaaaaaatggaagtttgacattacgtttcacaatcttaacaacttggag
ttatctggcgaagaaaatcaaacagctgtaaatttggtgatgcaagctcaaggcaggaga
agtgttaataaagagaacaggcgaatgctgaagttgtattcctggaaaaagaacagaagc
atcctggggattacttaccggctgtttgagcagctttctggagcacaaaaaactggctca
gttgacgaaatggggaaaatccttcttgagtttcctggtcttgtagtgtttgatgaagga
cacactcctcggaatgatcaaagtcatatgtggaaggctttgtcagaaatcaaaacaaaa
agccgtattctgctctctggaactccgtttcagaataactttcaggagctattcaataca
atctgcattgtgaggcccacttttgcagcctcgattgattctactaaattcaataaggat
cttcccaaaaaacgaggccggaaaagcaatggggaaaaatcgaaatggacttttgtggct
agtagtagtggaaaagttgctgatgacaaagaaaaacatgctacagaagtcaaagctcgg
attgcaccatttgtccatgtctataaaggttctgtgctacaagatagtcttcccgggtta
aggaactcaatagttgttttacacccaaccccgctacaggtgaagtttcataagagaatt
caaggggtgaaggaactatttcgatatgaaaacctagaggctttaatatgtattcatcct
tccctcttgcttaaggataaggaagatgcattttctgccgaccggggtaggttagaggag
cttaaattaaatcccgatgctggagtcaaggcaaaatttgtgatggaactcattcggctc
agcgatgctatgaaggaaagagttctggttttcagtcaataccttgatccgttaatcctt
ataagggatcttctgaaatctctatttcagtggactgaaggggaagaggtgctgtatatg
gatgggaaatgtgatatgaagcagcgtcaatcctcgatgaaggttttcaatgatccatct
agcaatgccaaggtattactagcttcaactaaagcatgttccgaaggcataagccttgtt
ggagcttccagggttgtattgcttgatgtcgcatggaatccatctgtggagaggcaagca
atatcccgtgcctacaggctgggacagaagaaggttgtgtttgtctaccatctcctcatg
gacggagctaacgaagaggataaatacagtcgccaagttgacaagagtcgtttatctgag
ttggtgttttctgattcagacaagaaggctctcgagaaggaaatccgagccacagtttca
gaggataaaatcttggaagagatggctcagcacgagaaactgaagcacatatttaaaagc
atagctttactgcatgaagacatatactttgagcagctaggccagtcaacttttggttaa
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