Prunus persica (peach): 18777785
Help
Entry
18777785 CDS
T03092
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
pper
Prunus persica (peach)
Pathway
pper03030
DNA replication
pper03420
Nucleotide excision repair
pper03430
Mismatch repair
pper03440
Homologous recombination
pper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18777785
03420 Nucleotide excision repair
18777785
03430 Mismatch repair
18777785
03440 Homologous recombination
18777785
03460 Fanconi anemia pathway
18777785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pper03000
]
18777785
03032 DNA replication proteins [BR:
pper03032
]
18777785
03400 DNA repair and recombination proteins [BR:
pper03400
]
18777785
Transcription factors [BR:
pper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18777785
DNA replication proteins [BR:
pper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
18777785
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
18777785
MMR (mismatch excision repair)
18777785
DSBR (double strand breaks repair)
HR (homologous recombination)
18777785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
18777785
NCBI-ProteinID:
XP_007210879
UniProt:
M5WRY3
LinkDB
All DBs
Position
G5:16442821..16446651
Genome browser
AA seq
609 aa
AA seq
DB search
MAKLGPTPDAISTILACPDPSGSVERPDIVIQVLDLGPRGITYKFTASDGKMKLKGMFSS
QLASQITSGNIQNLGLVRILDYAVNEIPGMSENYVLVKQCEVVSPALETEIKNEVKSEVK
SGEVGIILKPKQEMVSKSASQIVHEQNGNMAPAVRMAMTRRVHPLVSLNPYQGNWTIKVR
VTNKGTMRTYKNARGEGCVFNVELTDEEGTQIQATMFNEAAKKFFEKFELGKVYYISKGS
LRVANKQFKTVQNDYEMNLNENSEVEEAINEAAFVPETKFNFVPVDMLGPHVNGKELVDV
IGVVQSVSPTMSIRRKSNNESIPKRDITIADETKKTVVVSLWGELATSVGQELLDIADQS
PIVAIKSLKVGDFQGVSLSTLSRSTVVVNPELPEAKRLRSWYDSEGKGASLASVGNGMSP
LAKSGARSMYSDRVSLSHISDDPSLGEDKPVFFSVKAFISSIRPDQALWYRACKTCNKKV
TEAIGSGYWCEACQKNDEECSLRYILVARVTDASGEAYLSLFNEEAERVIGCSADELDKL
KSQEGEENVYQLKLKQATWVPHLFRVSVSQNEYNNEKRKRITARAVAPVDFAAESKFLLE
EISKMKASQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagctaggaccaaccccagatgcgatttcgaccattttggcctgtccggatccg
agtgggtcggttgagcggcccgatatcgtgatccaggtcctcgatctcggtcccaggggc
attacttacaagtttactgctagtgatggaaagatgaagctaaaggggatgttctcctcc
cagctggcttcccagattacctctgggaacattcagaacctgggtctcgttcgcattctg
gattatgctgttaatgagattcctggcatgtctgaaaactatgtgcttgtaaaacaatgc
gaggtggtttcacctgcacttgagacagagataaaaaatgaggtcaaaagtgaggtgaaa
agtggagaagttggcattattttgaaacccaagcaagaaatggtttccaaatcagcttct
caaattgtgcatgagcagaatggaaatatggccccggctgtgcgaatggccatgacccgg
agggtgcatccgcttgtttccttgaatccttaccaaggaaattggaccataaaggttcgt
gttacaaacaagggtactatgcgtacctacaagaatgctagaggtgaaggctgtgtcttc
aatgtggagttaacagatgaagaaggcacacaaattcaagcaacaatgtttaatgaagct
gcaaagaagttctttgagaagtttgaattaggaaaggtttattacatttcaaagggatct
ctaagggttgctaacaagcagtttaagacagtgcaaaatgattatgaaatgaatttaaat
gagaattctgaggttgaagaagctatcaatgaagcagcttttgttcctgaaacaaaattc
aattttgttccagttgatatgttaggtccccatgttaatgggaaggagcttgtggatgtc
attggagttgttcaaagtgtgtctcctacaatgagcatcagaaggaagagcaacaatgag
agtattccaaagcgtgatattaccattgctgatgaaacgaaaaagacagttgtggtttct
ctgtggggtgagcttgcaactagtgtaggccaggaactgcttgacattgccgatcaatct
cccatagttgctatcaagtccctcaaagttggagacttccaaggtgtgtcattgtcaaca
ctgagcaggagcacagtagtagtcaatcctgaattacctgaagcaaagaggttgaggtcc
tggtatgattctgaaggtaaaggggcttcattggcctctgttggcaatggtatgagccct
ttagccaagagtggagcaaggtccatgtactctgacagagtctccttgtctcatatatct
gatgacccatccttgggtgaggataagcctgtgtttttcagtgttaaagcgtttataagt
tccatcaggcctgatcaggcactgtggtaccgtgcttgcaaaacttgcaacaagaaagta
actgaagctattgggtctggttattggtgtgaagcgtgccagaaaaatgatgaagaatgc
agtttaaggtatatattagttgcaagagtcactgacgcaagtggggaagcatatctttct
ctatttaatgaagaagcagagagggttattgggtgctctgcagatgagctggacaaattg
aaatcacaggagggagaggagaacgtataccaactgaagctgaaacaagctacttgggtt
cctcatctttttcgggtcagtgtttctcagaacgagtacaataacgagaagaggaaaagg
ataactgccagggcagttgctcctgttgattttgctgctgaatcaaagtttttgctagaa
gagatatcaaagatgaaagcttcccaatag
DBGET
integrated database retrieval system
