Prunus persica (peach): 18777882
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Entry
18777882 CDS
T03092
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pper04131
]
18777882
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pper04147
]
18777882
Membrane trafficking [BR:
pper04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
18777882
Exosome [BR:
pper04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18777882
Exosomal proteins of bladder cancer cells
18777882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
TPR_2
Zn_ribbon_19
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
18777882
NCBI-ProteinID:
XP_007210424
UniProt:
M5WQM6
LinkDB
All DBs
Position
G5:complement(17150809..17157415)
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPNLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILSSHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQRDTQVIPIRRPG
STTLNQSPRTLSYNPSENAVLICSDLDGGSYELYLIPKDSISRGDSMQDAKRGVGGSAVF
MARNRFAVLDKSNNQVLIKNLKNEVVKRSVFPFAVDAIFYAGTGNLLCRAEDRVSIFDLQ
QRIVLGELQTPFIKYVVWSNDMESVALLSKHAIIIASKRLVHQCTLHETIRVKSGGWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI
FKLSLFKKRYDHVMSMIRSSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLVTGNMEKLSK
MLKIAEVKNDVMGQFHNALYLGNVQERIKILENVGHLPLAYITASVHGLHDVAERLSAEL
GENVPTLPQGKVPTLLMPPTPVMCGGDWPLLRVMRGIFEGGLDNIGRGAADEEDEAADGD
WGEELDMVDVDGLQNGDVTAVLEDEEVAEGNEEGGGWDLEDLELPPEADTPRASVNSNSS
VFVAPTIGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLRPMFLDLHTG
SHSYLRAFSSTPVISLAVERGWNESATPNVRGPPALVFNFSQLEEKLKAGYKATTAGKLT
EALRLFLGILHTIPLIVVDSRREVDEVKELIIIVREYVLGLQMELKRREIKDNPVREQEL
AAYFTHCNLQMPHVRLALVNAARICFKAKNFATAANFARRLLETNPTIEIQAKTARQVLQ
GAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVPTQEGLLCTVCDL
AVVGADASGLLCSPTQVR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagtttgaaacgaagagtaatagagtgaagggactgagcttccacagtaag
agaccgtggatcctcgcaagtcttcacagtggtgtgatccagctatgggactaccgtatg
gggactctcattgatcgattcgacgagcatgatgggcccgttcgcggtgtccacttccac
aaatctcagcctctctttgtgtctggaggggatgattataagatcaaagtttggaactat
aagatgcataggtgtctttttacacttcttgggcaccttgattatattcgtaccgtgcag
tttcaccatgagtacccatggattgttagtgccagtgatgaccagaccattcgtatatgg
aactggcagtcacgtacttgcatttcagttttgacaggccacaatcattatgtcatgtgt
gcctcattccatcctaaagaagaccttgttgtatctgcctccttagatcagactgtccgt
gtttgggatattgggtccctcaagaagaagactgtatcccctgcagatgacatactacga
ctaagtcagatgaatacagatctttttggtggtgttgatgctgttgttaagtatgtcttg
gaagggcatgatcgaggtgttaattgggcttcattccatccgaacctacctttgattgtc
tcaggcgcagatgatcgccaagttaaattgtggcggatgaatgatacaaaggcttgggaa
gtggacacactgagagggcacatgaataatgtttcatgtgttatgtttcatgccaaacag
gacataattgtatcgaactcggaagacaaaagtatccgtgtttgggacgtaacaaagcga
actggaattcaaactttccgacgagagcatgaccgtttttggattctttcatctcaccct
gaaatgaatctgttggctgcaggtcatgacagtggcatgatcgtatttaagttagagagg
gaacgtccagcctttgcagtgagtggtgattctctgttctatgctaaggatcgcttcttg
cgatactatgagttttcaacccaaagggacacacaagttattcccattcgacgccctggt
tcgaccactttaaatcaaagtccgaggactctttcttacaatccttcagaaaatgcagtt
cttatttgctcagacttggacgggggatcttacgaattgtatttgatacccaaggacagc
attagtaggggtgacagtatgcaagatgcaaagagaggtgttggaggttcagctgtgttt
atggcacgaaataggtttgctgtgcttgacaaaagcaacaaccaagtcttgattaagaat
ttgaaaaatgaggttgttaaaaggagtgtttttccttttgctgttgatgcaatattctat
gccggaacaggtaatttgctgtgtagggcagaggacagagtgtctatatttgacctccag
cagaggattgttcttggtgagcttcaaacccctttcatcaagtatgttgtttggtccaat
gacatggaaagtgttgccttgctcagcaaacacgccattattattgctagcaagaggctt
gtgcaccagtgtactcttcatgagacaatccgtgtaaagagtggtggctgggatgacaat
ggtgttttcatttacacgactctaaatcacataaaatattgtctccctaatggagatagt
gggataatcagaaccctagatgttcctatatacatcacgaaggtttctggaaataccatc
ttttgcttggatcgggatgggaaaaacagagccatagttattgatgccaccgaatacatt
ttcaagttatccctgtttaagaagaggtatgaccatgttatgagcatgataaggagctca
cagctctgtgggcaggcaatgattgcttatctgcaacagaaggggttccccgaagtggct
ctccattttgtgaaagatgaaagaaccagattcaatctggccctagagagtgggaatatt
caaattgcagtggcatccgctacagcaattgatgaaaaagattactggtataggttgggg
gtggaggctcttcgtcagggcaatgcaggtattgtggagtatgcctaccagaagactaaa
aattttgagaggctatctttcctttatctcgtaactggtaatatggaaaagctgtcaaag
atgctgaaaattgctgaggttaagaatgatgtcatgggtcagttccacaatgcactgtat
ctaggcaatgtccaggagcgtattaagatcttggagaatgttggccacttaccccttgct
tacatcacagcttcagttcatggcctacatgatgttgctgaacggctatctgctgagttg
ggagaaaatgttccgaccttgccccaggggaaagtacccactcttttgatgcccccaaca
ccagttatgtgtggtggtgattggcctcttcttagagtcatgagaggtatatttgaaggt
gggttggataatattggcaggggtgctgcagatgaagaggatgaggctgctgatggtgac
tggggtgaggagctggacatggttgatgttgatggcttgcaaaatggagatgtcactgct
gtattggaagatgaggaagtggctgaaggaaatgaggaagggggaggatgggaccttgaa
gatttggagctaccccccgaagcggacacaccaagggcttctgttaattctaattcatca
gtttttgttgctccaactattggcatgcctgtaagccagatttggatccagagatcttct
cttgctgctgaacatgcagcagcaggaaattttgatactgcaatgcgcttgctgaacagg
caacttggaatcaaaaactttgctcccttgagacccatgtttcttgatcttcacactggc
agccacagctatctacgtgcattttcatctactccagtgatatcacttgccgttgagcgc
gggtggaatgaatctgctaccccaaatgtgagaggcccgccagcacttgtgttcaatttt
tctcagttggaagagaaactcaaagctggttacaaggctacaacagctgggaagttaact
gaagctcttaggctcttccttggcattcttcacacaattcctttgattgttgttgattca
aggagggaagttgatgaagttaaggagttaattataatagtgagagagtatgttctggga
ttgcaaatggagctgaagagaagggaaattaaagataatccagtacgtgaacaggagctt
gcagcttatttcacacactgcaatcttcaaatgcctcacgtaaggcttgcattggttaat
gcagcgagaatttgcttcaaggcaaagaactttgccactgcagctaactttgccaggcgg
ctattggaaaccaaccccaccatcgagattcaagcaaagacagccaggcaagtgctgcaa
ggagcagagaggaatatgactgatgcctctcaactgaattatgatttcagaaacccattt
gtgacttgtggggcaacatatgtaccaatttaccgaggacagaaggatgtctcttgcccg
tactgtagctcacggtttgtgccaacccaagaagggctgctctgtactgtttgtgatctt
gcagtggttggggcagatgcttcagggttgctatgttctcctactcaggttcgatag
DBGET
integrated database retrieval system
