Prunus persica (peach): 18777976
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Entry
18777976 CDS
T03092
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pper
Prunus persica (peach)
Pathway
pper03022
Basal transcription factors
pper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18777976
09124 Replication and repair
03420 Nucleotide excision repair
18777976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18777976
03400 DNA repair and recombination proteins [BR:
pper03400
]
18777976
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
18777976
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
18777976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
18777976
NCBI-ProteinID:
XP_007211102
LinkDB
All DBs
Position
G5:16862617..16868169
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AA seq
490 aa
AA seq
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MELEASELIAAGTIRLSSCKACRLASPSSTSSSLSSTTSPRMVKSANYKATVRDPGTLGV
LTMTENKFVFRPNASTAKRALDVDFRQITGLKNTKEGGDRSPWLHLSEKDKTYIFEFASF
RDLHLCREFVANAVAKRGEAAKPTSSDEQISRAEIMHRMKLLQENSELQKLHMQYVMRGV
LTEAEFWEARKKFGDVDSRPKPKQRAGFRSSMIMDTKPMTDGRTNKVTFSLTADIKYQIF
ALKPAVHQAFLALVPSKTTEKDFWTKYFRAEYLQSTGNAAAVEAEAADDEELAMLLEEDE
VLAREARRKLRRVDPTLDMEADQGDDYTHLPDHGIIFFRDVVYKRRRTLSQDLNRQGAVV
LQGRSIVEVDLEDTSSVAEAFNIMRSREEEADKSGVQERFGRIARTTEMEDVQEPHHLPV
AQLLCMKDPRDYFDTQQANNNAVKTEEAYGSLRKSISKIKSIGLGNSTVAPEIALAVFNG
LPAPPTPCQC
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggagctagaggcatctgaacttatagcagcaggcactatccgtttaagctcgtgcaaa
gcttgccgtcttgcctccccttcctccacatcttcatcactgtcatccactacttcacca
cgaatggtgaagagtgctaattacaaggccacagtgagagatcctgggactcttggggtt
ttaactatgacggagaacaagtttgtgttcaggccaaacgcgtcaacagcgaaacgagcg
ctcgatgtggacttcagacaaattacaggtctaaaaaacactaaggagggaggagataga
tcaccttggcttcatctcagtgaaaaggacaaaacttacatctttgagtttgcaagtttt
cgtgatcttcatctatgccgagagtttgtagccaatgccgttgctaagcgtggagaagct
gcaaaacctacttcttctgatgaacaaatcagtagagcagaaataatgcaccgtatgaag
ctattacaagaaaacagtgaattgcagaaacttcatatgcagtatgtaatgcgtggtgtc
ttaacagaagctgaattctgggaagctaggaagaagtttggtgatgtagatagccgtcca
aagcccaagcaaagggctggtttcagaagctcaatgataatggacaccaaacccatgacg
gatggtcgaacgaacaaggttactttcagtttgactgcagatattaagtatcagatcttt
gccctgaaaccagctgttcatcaggcatttcttgctctggttcccagtaagacgacggag
aaagacttctggacaaagtatttcagagctgaatacctccaaagcacagggaatgctgct
gcagttgaagcagaagccgccgatgatgaggaattggcaatgcttttggaggaggatgag
gtattggcgagggaagctcgtcgaaagcttcgacgggtcgatccaactttggacatggaa
gctgaccaaggagacgattatacgcaccttccagatcatgggataatattctttcgggat
gtggtttacaagaggaggagaactttatcacaagaccttaaccggcaaggcgctgttgtt
cttcaaggaagaagcatcgttgaagttgatttagaagatacgtcaagtgttgcagaggcg
tttaatataatgcggtcaagagaggaggaggctgataagagtggtgtgcaggagagattt
ggtaggattgctcggacgactgagatggaggatgttcaagaacctcaccatcttcctgtt
gctcaattattatgtatgaaggatcctcgagactactttgacacgcaacaagctaataat
aatgcagttaaaactgaggaagcatatggctccttgaggaagtctatatctaaaatcaag
agcattggattgggaaattccacagttgcaccagaaattgctcttgcggtttttaatgga
cttccggcaccaccaacaccatgtcagtgttaa
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