Prunus persica (peach): 18778296
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Entry
18778296 CDS
T03092
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pper
Prunus persica (peach)
Pathway
pper04120
Ubiquitin mediated proteolysis
pper04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18778296
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
18778296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pper04121
]
18778296
Enzymes [BR:
pper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18778296
Ubiquitin system [BR:
pper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18778296
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18778296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
zf-C3HC4_2
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_EML
zf-C3HC4
Beta-prop_CAF1B_HIR1
WD40_like
zf-RING_2
zf-C3HC4_3
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF12
WD40_RFWD3
zf-RING_UBOX
Beta-prop_WDR35_TULP_N
zf-C3HC4_4
DUF1664
zf-RING_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
18778296
NCBI-ProteinID:
XP_007211377
UniProt:
M5WH19
LinkDB
All DBs
Position
G4:630379..634888
Genome browser
AA seq
650 aa
AA seq
DB search
MEDSSMGGALVPTVKGCEHLPGSATETASEEPDKDIMCPICMQIIKDAFLTACGHSFCYI
CILTHLRIKSDCPCCAHSLTTDLIFPNFLLDKLLKNALASRMAKTASPFEQLRRGLHQGC
EMSIKELDGLLSLLEEKKRKMEQQESEMSMEMMLGFLHCLKNQKFEELNEIKADLRYIKE
DITAVERRRLELCSWEQESSIKLKMLAPGDQQQHSNGIVCSTQHVQARMSCNDLQNKRSD
VKAQAISKALQLNNDYGSSSDMQCVTTPGVASLARKRRVHSQFNHLQECYLQKRRNWYRQ
EERGANTMNIEGYNPGLEDFQSVLTSFTQYSRIRVIAELRHGDLFHSANIVSSIEFDRDD
ELFATAGVSRCIKVFEFSSVVNEPADIHCPIVEISTRSKLSCLSWNKYTKSHIASSDYEG
IVSVWDVTTRQSVMEYEEHEKRAWSVDFSSIDPSMLVSGSDDCKVKIWCSKQEESVLNID
MKANICSVKYNPGSSFFVAVGSADHHIHYYDLRNISQPLHVFSGHRKAVSYVKFLSNNEL
ASASTDSTLRLWDVKENLPLCTYRGHMNEKNFVGLSVNNEYIACGSETNEVFVYHKAISK
PMAWHGSSDLGENDDDRGSFFISAVCWKRDSPMLLTANSRGTIKVLLLAA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagctcaatgggcggtgcgctagtccccaccgtgaaaggatgtgaacactta
ccaggctccgccaccgaaacggcgtcggaggagccggacaaggacattatgtgcccgata
tgcatgcagatcatcaaagacgccttcctcacggcttgtggccacagtttctgctacatc
tgcattctcactcacctccgcatcaagagtgattgcccttgctgcgctcactctctcacc
acagacctcattttccccaatttcttgctcgacaagttgctgaaaaatgctttggcttct
cgaatggcgaagactgcatctccatttgaacaacttcgtcggggactgcaccagggttgc
gagatgtcgattaaagagctggacggactgttgtctctccttgaagagaagaagagaaaa
atggagcagcaagaatctgagatgagcatggagatgatgcttggcttcttacattgcctg
aaaaaccaaaagtttgaagagctcaatgagataaaggccgatcttcggtacatcaaggag
gacataactgcggttgagagacggaggctagagctgtgcagctgggaacaagagagctcc
ataaagctgaaaatgcttgctcctggtgatcagcagcagcacagcaatggcattgtctgt
agcacgcaacacgtgcaagctcggatgagttgtaatgatttacagaacaaaagatctgat
gtaaaggctcaagcaatctccaaggcactccaactaaataatgattatggcagcagctct
gatatgcagtgtgtgacaacaccaggtgtagcatcactagcaagaaaaaggcgagtccat
tcacagttcaatcacctacaagagtgctacttgcaaaagcgacgaaattggtacagacag
gaagaaaggggcgcaaacactatgaatatagaaggttataatccaggccttgaagatttt
caatctgtgcttacaagctttacacaatacagtcgaataagggtcattgctgaactgagg
catggtgatctttttcactctgccaatattgtgtccagtatagaatttgatcgtgatgat
gaactgtttgctactgctggagtttcacggtgcataaaagtttttgaattttcctcggtg
gttaatgaaccagcagatatccactgtcctatcgtagagatatccacacgatccaaactt
agttgcttgagctggaataagtacactaaaagccatattgctagtagcgactatgagggg
atagtcagtgtttgggatgtaactactcgtcagagtgtgatggaatatgaggagcatgaa
aagcgggcttggagtgttgatttttcgtctattgatccttcaatgcttgtatccggaagt
gatgactgcaaggtcaaaatttggtgctcaaagcaagaagaaagtgttcttaatatcgac
atgaaggcaaatatttgttctgtcaagtataatcctggatccagcttttttgtggcagtt
ggctctgcagatcatcacattcattattatgacttgagaaatatcagccaaccactgcat
gtctttagtgggcataggaaagctgtttcatatgtgaaattcttgtctaacaatgaactt
gcttctgcatccactgacagcacattgcgattgtgggatgtaaaggaaaacttgcctttg
tgcacatatagaggccatatgaatgagaagaattttgtgggtctctcagtaaataacgaa
tatattgcttgcggcagcgagacaaatgaagtgttcgtttaccataaggcaatctcaaaa
cctatggcttggcatggctcttcagatttaggcgagaatgacgacgacagaggatcattc
tttatcagtgctgtatgttggaagagggatagcccaatgctattgactgcaaacagtcga
ggaacaattaaagtgcttctacttgcagcctga
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