Prunus persica (peach): 18778714
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Entry
18778714 CDS
T03092
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18778714
03015 mRNA surveillance pathway
18778714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18778714
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
18778714
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_ACIN1
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-GeneID:
18778714
NCBI-ProteinID:
XP_007212305
UniProt:
M5WIF7
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All DBs
Position
G4:complement(7802918..7808267)
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AA seq
398 aa
AA seq
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MAKPSRARRSPLSGSGSDSSSRSRSRSRSFSGTDSRSSSHSRSRSRSRSFSSSSPSRSGS
SRSRSPPSKKSPEVARRGRSPPPQAKKASPPQRKASPIRESLILHIDQLTRNVHEGHLRE
IFCNFGDVVKVELAMDRAVNLPKGFGYVEFKTRADAEKAQLYMDGAQIDGNVIRARFTLP
QRQKGSPPPKPVSAAPKRDAVKTDGVNADKDGPKRPREASPRRRPPLSPRRRSPVARRGG
SPRRLPDSPPRRRAGSPARRGDTSPRRRLASPSRGRSGSPPPRRRSPVRIRGSPIRRRSP
FPPRRRSPPRRVRSPPRRSPINRRRSRSPNRRLARSRSRSISPRRGRGPATRRGRSSSYS
GSPSPRKVPRKISRSPRRSLRRRSSSKSSSSSSPPRKP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccaagccgagcccgtcgctcgccactttcaggctccggttctgactcatcg
tcacgctcccgctcgcgttcgcgctccttctcaggcactgactcgcgctccagctcgcat
tctcgctctcgatctcgctccaggtccttctcttcctcctctccgtcccggagtggcagc
tctcgtagccgaagccctccctccaaaaaaagtcctgaagttgctagacgaggtcgttct
ccaccaccacaagctaaaaaggcatctccaccccaaaggaaagcttctccaattcgcgag
tcacttattcttcacattgaccagcttacaaggaatgtgcatgaaggccatttacgagaa
atattttgtaactttggtgatgttgtcaaagtggaactggcaatggatcgtgctgttaat
cttccaaaaggatttggatatgttgagttcaagacgagagcagatgctgaaaaagcacag
ttatatatggatggcgctcaaattgatggtaatgtaatccgagcaaggtttacattacct
cagcgtcagaaggggtcaccgccacctaagcctgtttccgctgctccaaagagagatgct
gtgaaaactgatggtgtcaatgctgacaaggatggaccgaagcgaccaagggaagcttct
cctcgtcggaggccacctctctcaccacgaaggagatcccctgtagctcgcagaggtgga
tctccaagacgactgccagattctccaccacgtcgtcgtgctggctctcctgctcgtcgt
ggtgatacttctccaaggaggaggcttgcatctccatctagaggtcgttctggatctccg
ccaccaaggcgacgttcccctgttaggatacgtggcagtcccattcgtagacgctctcct
tttcctccaaggcgccgttcacctcctagacgggttcgtagtcctcccagaaggtctcca
atcaatcgtaggcgtagccggtctcctaatcgtaggcttgctcgatcacgatcaaggtca
atctcgccgcggagaggtcgaggaccagctactagacgtgggaggtcgtcatcatactct
ggatcacctagtccacggaaggtaccccgaaagatatctcgtagtccaagaaggtctttg
aggagaagaagcagtagcaagagcagcagcagcagttcacctcctcgtaagccatag
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