KEGG   Prunus persica (peach): 18778981
Entry
18778981          CDS       T03092                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
pper  Prunus persica (peach)
Pathway
pper03420  Nucleotide excision repair
pper04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18778981
  09124 Replication and repair
   03420 Nucleotide excision repair
    18778981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pper04121]
    18778981
   03400 DNA repair and recombination proteins [BR:pper03400]
    18778981
Ubiquitin system [BR:pper04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     18778981
DNA repair and recombination proteins [BR:pper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      18778981
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      18778981
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st DUF6213
Other DBs
NCBI-GeneID: 18778981
NCBI-ProteinID: XP_007213714
UniProt: M5X015
LinkDB
Position
G4:4334010..4344471
AA seq 1089 aa
MSVWNYVVTAHKPTNVTNSCVGNFTGPQELNLIIAKCTRIEILLLTPLGLQPILDVPIYG
RIATLQLFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIQFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYIGSSYGDSQLVKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVFNQLVQVTSSSVRLVSSTSRELK
NEWFAPAGYSINVATANATQVLLATGGKHLVYLEIGDGVLTQKTHAQLDFEISCLDINPI
GENPNYSQLAAVGMWTDISVQIYSLPDLSRITKEHLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFILNTSTGELTDRKKVSLGTQPITLRTFSSKSTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAISSVKYNQSSAEDSETHFIRLLDDQSFDLITYYQLDAFEYGCSILSCSFSDD
SNVYYCVGTAYVLPEENEPTKGRILVFTVEDGKLQLVAEKETKGAVYSLNAFNGKLLAAI
NQKIQIYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEES
SIEERARDYNANWMSAVEILDDDVYLGAENFFNLFSVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPQEQYVFLEKLQSNLRKV
IKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSKMDEISKQMRVSVEELCK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtgtctggaactatgtggtcacggcccacaagcccaccaacgtcaccaactcatgc
gttggcaatttcaccggacctcaggagctcaatctcatcatagcgaaatgtacacgtatt
gaaattcttctacttactcctctgggcttacagcctatcttggatgtgccaatatacgga
aggatagcgacactccaactttttcgacctcatggtgaagcacaagattttctatttatt
gccacagaaagatacaaattttgtgttcttcaatgggatgccgaaacatctgagctcatt
acaagggcaatgggggatgtctcggatcgcataggtcgtcctacagacaatggtcaaatt
ggtataattgatccagattgcagattaattggactccatttgtatgatggattgtttaag
gttattccttttgataataaagggcagctcaaggaggcatttaacattcggcttgaggaa
cttcaagttttggatatccagtttctctatggttgttcaaaaccaaccattgtagttctg
tatcaggataacaaagatgctcgccatgtcaaaacatatgaagttgctctgaaagataaa
gattttgttgagggtccttgggcacagaacaaccttgacaatggggctgatttgttgata
ccagttcctccaccactttgtggcgttctgattattggagaagaaacaattgtttattgc
agtgccaatgcatttaaagcaatcccaataagaccttccatcacgagagcctatgggaga
gtagatgcagatggttctaggtatttgcttggtgatcatgccgggcttcttcacctactt
gttataacccatgagaaagaaaaggtgactggactcaaaattgagctcttgggagagact
tccattgcatctactatttcataccttgataatgcatttgtctatatcggatcaagctat
ggggattcacagcttgtaaagctaaatctacagccggatgcaaaaggttcatatgtcgaa
gttttagaacggtatgtcaatttggggccgatagttgacttttgtgtggttgatcttgag
aggcaaggccaaggtcaggtcgtaacttgttctggagcttacaaggatggttctcttcgc
gtagttcgaaatggaattggaatcaatgaacaggcatcagttgagcttcaaggtattaag
ggaatgtggtcattaagatcctccactgatgatccccatgacaccttcctggttgtaagc
tttatcagtgagacacgaattttggcaatgaatcttgaggatgagttggaagaaactgag
atagaaggcttctgttctcaagtgcagactttattttgccatgatgctgtcttcaatcaa
cttgtgcaggtcacttcgagctctgtaagactagtcagttctacatctagggagctgaag
aacgagtggtttgctccagcaggctattcgatcaatgttgccactgctaatgccacccag
gttttattggcaaccggaggaaagcatttagtttatttagaaattggtgatggggtattg
acacagaaaacccatgcacagttggactttgagatctcatgccttgacataaaccccata
ggtgaaaatcccaattatagccagctagcagccgttggaatgtggacagatataagtgtc
cagatatattcacttcctgacctgagccgcatcaccaaggaacatttgggaggagagatc
atacctcgttctgttcttctttgtgcctttgaagggatatcctatctgttatgtgccctt
ggagatgggcacctcttaaattttatattgaacacgagtactggtgagttaacagacagg
aaaaaagtctctcttgggactcaacccattacactccgtactttctcatccaagagtact
acgcatgtatttgctgcgtcggataggccaactgtcatttacagtagcaacaagaagctg
ctttacagcaacgtaaatttgaaagaagtcagccatatgtgcccattcaactctgctgct
tttccagacagccttgcgattgctaaagaaggtgaactaactattggcacaattgatgac
atccagaagcttcatattcgctctattcccttaggggagcatgcacgccgtatctgccat
caggagcagtccaggacctttgccatatctagcgtgaaatataaccagtctagtgcagaa
gattcagaaacacacttcatccgcttgttagatgaccagagttttgacctcataacatat
tatcaactcgatgcttttgagtatggctgctccatacttagctgttccttctctgatgac
agtaatgtatattactgtgtcgggacggcatatgttctcccagaagaaaatgagccaacc
aaaggtcgcattctagttttcacggttgaagatgggaagctgcaactcgtcgctgagaag
gaaaccaagggtgctgtttactctttgaatgcattcaatggcaagttacttgctgctatc
aatcaaaagatacagatatacaagtggactctgcgggatgatggtactcgcgagttgcaa
tcggaatgcggacatcacggccacatactagcgctttatgtccagactcgtggtgatttc
attgttgttggggatttgatgaagtcaatttctctgttaatctacaagcacgaggaaagt
tccattgaggagcgagcacgtgactataatgcaaattggatgtcagctgtagagatcctt
gatgatgatgtttaccttggagctgaaaacttcttcaacctcttcagtgttcggaaaaat
agtgaaggtgcaactgatgaggaacgtggccgtcttgaggttgttggtgagtatcaccta
ggtgaatttgtcaataggtttcggcatggctctcttgtcatgcgcttgccagactcggat
gtgggccagatcccaactgttattttcggcactgtcaacggtgtaattggagtcattgcc
tcacttccccaagagcagtatgtgtttttggagaagctccagtcaaacttgagaaaggta
ataaagggtgttggagggttaagccatgagcagtggaggtcattcaacaatgagaagaaa
actgtagatgccaaaaatttcttggacggcgatctaatcgaatcgttccttgatctcagc
cgtagcaagatggatgaaatttcaaaacaaatgcgcgtttcagtggaggagctctgcaaa
agagtagaagaattgacaaggctgcattga

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