Prunus persica (peach): 18779400
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Entry
18779400 CDS
T03092
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pper
Prunus persica (peach)
Pathway
pper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18779400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18779400
04121 Ubiquitin system [BR:
pper04121
]
18779400
03036 Chromosome and associated proteins [BR:
pper03036
]
18779400
03400 DNA repair and recombination proteins [BR:
pper03400
]
18779400
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
18779400
Ubiquitin system [BR:
pper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
18779400
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
18779400
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
18779400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-HC5HC2H
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-HC5HC2H_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
RTT107_BRCT_5
zf-RING_10
zf-rbx1
PHD_NSD
zf-Nse
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
18779400
NCBI-ProteinID:
XP_007213708
UniProt:
M5WM85
LinkDB
All DBs
Position
G4:4294288..4299556
Genome browser
AA seq
1024 aa
AA seq
DB search
METPAHLEKMGRELKCPICLSLLNSAVSLNCNHVFCNSCIVKSMKSGSNCPVCKIPYRRR
EIRPAPHMDNLVSIYKSMEVASGINIFVTQNAPSTKSSDGKLQAQDDGHDEQDIPKHCQD
RDEKQKSLRGKGSRKTKSNLKNSGSLSVKPSFPTKKRVQVPQCPLSETPTRPEKTVGKLM
DERSKHSSTTLKGRPVLNEVGEPMLSPFFWLRDKDEENLSQHTDGDQLTDSPPNVPTFSD
IKDSEDEYSARLTPPGEVHGKSSNVADLFDSEMFEWTQRECSPELFQSPSKMQVPDSDDI
DRVQEKELKEISQNKKLDAHSAKNARSRNSRQSSGNMYFLPDIPPAGAKDNSQVVSNELN
KQGRQTRNISKRKCATSHTDPGADVSVNVNSKGSKVFYEEPVCKNNSSSLAKISKRSKKE
HPSVVAMKPTSENVHVLSTEAETQNNGDDKGITESPTSLGKSEGGSAPPSKKAGKICNEV
NAKSQMHCPVRSRKQKMVSMPNKMLEEVSEVQKQANKDTTTDLSLINLSTVDNKKASEFG
NKSRKLQRGAKLCDRELKNKKATVSSDGNSKDDTFVRVGEGHGNVNENGNQPTEKIEGNC
DVPTDRSPVQKLPSLTNNLVLQRCEAIPSKIQCAFCLSSEESEASGEIVHYYNGKPVAVD
HNGGLKVIHAHRICTEWAPNVYFEDETAVNLEAELTRSRRIKCSCCEIKGAALGCYERSC
RKSFHVTCAKLMPECRWDIDNFVMLCPLHASSKLPNESSESQARRRKSNPRKQSNAEHYK
AAVKQDNTMPPDRKFCGSSKKLVLCCSSLTNAERESVSGFERLSGFTVLKNWDSSVTHVI
ASVDENGACRRTLKVLMGILEGRWILSMEWINACIEAMKLVNEEPYEINVDIYGIRDGPR
LGRLRLQNKQPKLFDGFKFYFMGDFVPSYKGYLQDLVIAAGGTILHRKPVPEGQKAFSAS
SPKCQTFIIYSLEQPEQGHPSKGTILDRRQSDAKALASSAGAMAASNSWILNSIAACKLQ
SFSE
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggagactccggcccacctcgagaaaatgggcagagagctcaagtgccccatttgtttg
agtctgctgaattctgcggtttcacttaattgcaatcatgtcttctgcaactcttgtatt
gtgaaatcaatgaaatcgggttccaattgtcccgtttgtaaaattccatatcggcgcaga
gagattcgtcctgctccacacatggataatttggttagtatttacaaaagcatggaggtt
gcttcaggaattaatatatttgtcactcagaatgcaccctcaactaaatcatcagacgga
aaactgcaagcccaagatgatggtcatgatgagcaagatatccctaaacattgtcaggat
agagatgagaaacagaaatccttaagaggaaaaggatcaaggaaaactaaatccaacctg
aaaaattcgggttctctttcagttaaaccttcatttccaaccaagaaaagggttcaggtt
ccacagtgtcctctttcagaaactcctacacgccctgaaaagacagttggtaaactaatg
gatgaaaggtctaagcacagttcaacaactttaaaggggaggccagttctaaatgaagtg
ggagaaccgatgctttcacctttcttttggttgagagacaaggatgaagaaaatttgagt
cagcatactgatggtgatcaactcactgatagtcctccaaatgttcctactttcagtgat
atcaaagactcagaagatgaatactctgctagattgaccccaccgggcgaagtgcatgga
aaatcttcaaatgttgcagatttatttgatagtgagatgtttgaatggacacaaagagaa
tgctcccctgagctcttccaaagtccttctaagatgcaggttcccgacagcgatgatatt
gatagagttcaagagaaggaactgaaagaaatctcacaaaacaagaaattagatgcacat
tctgctaaaaatgcaaggtctagaaattctagacaaagtagtggaaatatgtattttctg
ccagatattccccctgctggagcaaaagacaatagtcaagttgttagtaatgaattgaac
aagcaaggtaggcagacaaggaatataagtaaaagaaagtgcgctacaagtcatacggat
ccaggtgctgatgttagtgttaatgttaattcaaaaggatctaaagtattttatgaagaa
ccagtatgtaagaataattctagttctttggccaagatttccaaaaggagtaagaaggaa
catccatctgtggttgcaatgaagccaacatctgaaaatgttcatgtcctctcaacagaa
gctgaaactcaaaataatggtgatgacaagggcataactgaatcaccaacttcattagga
aagagtgaaggtggtagtgcaccacccagtaagaaggctggaaaaatctgtaacgaggta
aatgccaagagccagatgcactgcccagtaaggtcaagaaagcaaaagatggtctctatg
ccaaacaaaatgcttgaggaggtatcagaagtacagaagcaggcaaataaggatactaca
actgatttgtctcttataaatctctctacagttgataacaagaaagcctctgagtttggg
aacaaatccagaaaacttcagaggggagccaagttatgtgatcgagaattgaagaataaa
aaggcgacagtttcctctgatggcaactcaaaggatgatacttttgttagggttggagag
ggtcatgggaatgttaatgaaaatggaaatcaacccactgaaaagatcgaaggcaattgt
gatgtcccaactgatcgatcaccagtgcagaagcttccttcattgacaaacaatttggtc
ttgcagagatgtgaggccattcctagtaaaatccaatgtgctttctgtctttcatcagaa
gaatcagaggcgtctggagagatagtccactattataatggcaagcctgttgctgtggat
cacaatggaggactcaaggttattcatgcacacaggatctgcactgaatgggctcccaat
gtctattttgaagatgaaactgctgttaatcttgaagctgagttaactaggagtcgtaga
attaaatgttcttgctgtgaaattaaaggtgcagctcttgggtgttatgagaggagttgt
cgtaagagctttcatgtcacctgtgcaaagttgatgcctgagtgtcgatgggatattgat
aattttgttatgttatgcccccttcacgcctcttctaaattgccaaatgaaagctctgaa
tctcaagcaaggaggaggaagagcaatcctagaaaacaatctaatgctgaacattataaa
gctgctgttaaacaagacaacaccatgcctccagatcggaaattttgtggatcatccaag
aaattagttctctgttgttcatctctcacaaatgcagagagggaatctgtttctggattt
gaaagattatctggatttacagttttaaagaattgggattctagtgtcacccatgttatt
gcgtcagtagatgaaaatggagcatgcagaaggaccctcaaagttttgatgggtatcttg
gaggggaggtggatcctgagtatggaatggattaatgcttgcatagaagccatgaaacta
gttaatgaggagccttatgaaattaacgtcgacatttatggaatcagggatggtcctcga
cttggtagactaagacttcagaacaagcaaccaaagctttttgatgggttcaagttttac
tttatgggagactttgtaccgtcatataagggttatctacaagacctagtaatagctgct
ggaggaactattctgcatagaaagcctgttccagagggccagaaagccttttcagccagt
tccccaaaatgtcaaaccttcataatttacagccttgagcaacccgagcagggtcatcct
agcaagggtacgatattggaccgcaggcagtctgatgcaaaggctttggccagttctgcg
ggagccatggcagcaagcaattcatggattttgaactccattgctgcctgcaagttacaa
agtttttctgaatag
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