KEGG   Prunus persica (peach): 18779649
Entry
18779649          CDS       T03092                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
pper  Prunus persica (peach)
Pathway
pper03018  RNA degradation
pper03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18779649
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18779649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pper03019]
    18779649
   03041 Spliceosome [BR:pper03041]
    18779649
Messenger RNA biogenesis [BR:pper03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     18779649
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     18779649
Spliceosome [BR:pper03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    18779649
 Complex C
  U2 snRNP components
    18779649
SSDB
Motif
Pfam: LSM SM-ATX LSM14 DUF150_C
Other DBs
NCBI-GeneID: 18779649
NCBI-ProteinID: XP_007212296
UniProt: M5X346
LinkDB
Position
G4:complement(8439877..8442780)
AA seq 93 aa
MLFFSYFKELVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDVELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcgtatttcaaggagttggtgggcagagaagtgacagtggagctgaag
aatgatcttgcaatcagaggaacactgcactcagtggatcagtacctcaacataaagcta
gagaacacaagggtcgtcgaccaagagaagtacccgcacatgttgtcagtgaggaactgt
tttattaggggatcagtcgtgagatatgtgcaactacccccagagggagtggacgttgaa
ctgctgcatgatgccaccagaagggaagctcgtggtggctga

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