Prunus persica (peach): 18779649
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Entry
18779649 CDS
T03092
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18779649
09123 Folding, sorting and degradation
03018 RNA degradation
18779649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18779649
03041 Spliceosome [BR:
pper03041
]
18779649
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18779649
mRNA degradation factors
5'-3' decay
Lsm complex
18779649
Spliceosome [BR:
pper03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
18779649
Complex C
U2 snRNP components
18779649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
DUF150_C
Motif
Other DBs
NCBI-GeneID:
18779649
NCBI-ProteinID:
XP_007212296
UniProt:
M5X346
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All DBs
Position
G4:complement(8439877..8442780)
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AA seq
93 aa
AA seq
DB search
MLFFSYFKELVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDVELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcgtatttcaaggagttggtgggcagagaagtgacagtggagctgaag
aatgatcttgcaatcagaggaacactgcactcagtggatcagtacctcaacataaagcta
gagaacacaagggtcgtcgaccaagagaagtacccgcacatgttgtcagtgaggaactgt
tttattaggggatcagtcgtgagatatgtgcaactacccccagagggagtggacgttgaa
ctgctgcatgatgccaccagaagggaagctcgtggtggctga
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