Prunus persica (peach): 18779713
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Entry
18779713 CDS
T03092
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18779713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18779713
03019 Messenger RNA biogenesis [BR:
pper03019
]
18779713
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18779713
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
18779713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_12
Torus
Motif
Other DBs
NCBI-GeneID:
18779713
NCBI-ProteinID:
XP_007214175
UniProt:
M5WNT3
LinkDB
All DBs
Position
G4:4446806..4452919
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AA seq
695 aa
AA seq
DB search
MEDSDGDINFDFEGGLDATAAAGPTNPGPPSNSLMQSDSGVAAVDTNPAAAAPQPNHPNP
NRSGGRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT
NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNTSNKFYQQR
NAGFPQQADKYQSAQGPNSVYQGVVGKPSTGESANVHQQQQVQQTQQQVGHTQTQNLPNG
LANQANRSAPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAENVIL
IFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGSAHYGRNFSVKWLKLCELSFHKTRHL
RNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSIAAESKREEEKAKGVNP
ENGGENPDIVPFEDNEEEEEEESDDEEESFGPVPGVGNEGRGRGRGGIMWPPHMPLARGG
RPMPGMQGFPPGMMGADAMPYGPAPDGFGMPNPFGVGPRGFNPYGPRFSGDFTGPTPGMM
FRGRPQQPGFPPGGYGMMMGPGRAPFMGGMGVGGANPGRPGRPTGMSPMFPPPSSQNTNR
MQKRDPRGPSNDRNERYSAGSGQGKGQEIPGLAGGPDDEARYQQASKAYREDQYGAGNNS
RNDDSESEDEAPRRSRHGEGKKKGRGSEGDVTSEH
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaagactcagacggagacatcaacttcgacttcgagggaggcctcgacgccaccgca
gccgcgggccccacaaacccgggtccaccatctaattctctgatgcagtccgactcgggc
gttgcggcggtggacaccaaccctgccgctgcggcgccacaacccaaccacccgaatccg
aaccggtcgggtgggcggagctaccgccaaacggtgtgccgtcactggctgcgtagcctt
tgcatgaagggcgaggcctgtgggttcctccatcaatacgacaagtcacgtatgcctgtg
tgtcgcttcttcaggttgtacggcgagtgcagggagcaggattgcgtgtacaagcacacc
aacgaggacattaaagagtgtaatatgtacaagttggggttttgtccaaatggtcctgat
tgccggtatagacatgcaaagctgcctggacctccacctcctgtggaagaagtccttcag
aagattcagcatttgaattcttataattacaacacctcaaataaattttatcaacaacgg
aatgctggctttccccaacaagccgataagtatcagtctgcacaaggccccaattccgtc
tatcaaggtgtggtgggaaaaccttcaacaggagagtctgctaatgtccaccagcagcaa
caggttcaacaaacccaacaacaggttggccacacgcagacacaaaatctacccaatggc
ctagccaatcaggcaaatagaagtgcgcctttgcctcaaggaatatctaggtattttatt
gttaaaagttgcaaccgtgaaaatttggaattatctgtacaacaaggagtgtgggcaact
caaaggagcaatgagtccaaacttaatgaagcttttgactctgctgaaaatgtgatttta
attttttcagtcaaccggactcgacatttccagggttgtgcaaagatgatgtccagaatt
ggtgggtctgttagtggagggaactggaaatatgcacatggatctgcgcattatgggaga
aatttctctgtcaaatggttaaagctatgtgaactgtcctttcacaaaactcgtcatttg
aggaacccctacaatgagaacttaccagtaaagataagtagagattgtcaagagctagag
ccctccatcggtgagcagttggcttccttgctttatcttgagccagatagtgaacttatg
gcagtttcgattgcggcagagtcaaaacgcgaagaagaaaaagcaaagggagtcaatccg
gagaatggtggtgagaacccagacattgtcccatttgaggacaatgaagaggaggaagag
gaagaaagtgacgatgaggaagagagctttggtccagttccaggggtaggaaatgagggc
agaggaagaggcagaggaggaatcatgtggccccctcacatgccactagcaagaggtggt
agacctatgcctgggatgcagggttttcccccaggaatgatgggtgctgatgcaatgccc
tatggacctgcacctgacggatttggtatgccaaatccttttggtgtgggccctcgtggt
ttcaatccatatggtcccaggttttctggtgattttacagggcccacgcctggcatgatg
tttcgtgggcgaccacaacaacctggatttccacctggtggttatgggatgatgatgggt
cctggacgtgcaccatttatgggaggtatgggggttggaggtgcaaatccaggccggcct
ggtcggccaactggtatgtctccaatgtttccaccaccatcatctcaaaacactaacagg
atgcagaagagagatccaaggggaccttccaatgatcgaaatgagagatatagtgctggc
tcaggccaggggaagggtcaagagattccaggtttagctggtggaccagatgatgaggca
cgttatcagcaagcatcaaaggcttaccgggaagatcagtacggtgctggtaacaactct
agaaatgatgatagtgaaagtgaggatgaggcaccgaggcggtcaaggcatggagaggga
aagaagaaagggagaggctcagaaggagatgttacctcagagcactag
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