Prunus persica (peach): 18779905
Help
Entry
18779905 CDS
T03092
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pper
Prunus persica (peach)
Pathway
pper00040
Pentose and glucuronate interconversions
pper01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18779905
Enzymes [BR:
pper01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
18779905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18779905
NCBI-ProteinID:
XP_007214229
UniProt:
M5X1K7
LinkDB
All DBs
Position
G4:813905..815356
Genome browser
AA seq
385 aa
AA seq
DB search
MASLSPLILLSCFLTYYIAPTSQAYSPGYYTTTPKTTMNVVDSCWRSKSNWAINRRALAN
CAVGFGQDAVGGKYGSTYVVTTSYDDPINPKPGSLRYGVIQTQPLWIVFAKDMVITLKNE
LIMNSFKTIDGRGAKVEIAYGPCITVQGVSHVIIHGISIHDCKPGKGGNVRSTPTHVGHR
RGCDGDAISIFASSHVWVDHCFLARSSDGLIDVTHASTAVTITNNYFSQHDKVMLLGHND
NFSADKGMKVTIAFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAVGGSANPTIFSEG
NYFIAPETAYAKQVTKRESGGRWNNWKWRSSKDMFKNGAFFVQSGYGSCYPLYSKTQSFK
VLDGSMVPALTSSAGPLRCFVGKAC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttatcccctctcatattgctctcatgttttctaacttactatattgctcca
acatctcaagcctattcaccgggctactacaccaccaccccaaaaaccaccatgaacgta
gtagactcatgttggcgctccaagtccaattgggccattaaccgccgcgctttggccaac
tgtgcagtaggttttggtcaagacgcggtgggaggaaaatatgggagtacttacgtggtc
actacctcatacgatgaccccataaaccctaaacctggctcactccgttacggggtgatc
caaacgcagccactgtggatcgtctttgccaaggacatggtgatcacactaaaaaatgag
ctcattatgaacagctttaaaaccatagatggtcgaggagctaaagtggaaattgcctac
gggccatgcataacggtgcagggagttagccatgtgattatacatggaataagtattcat
gattgtaagccagggaagggtggaaatgttaggagcacccctacacatgtagggcaccgg
cgaggatgcgatggagatgccattagtatctttgcttcttcgcatgtttgggttgaccat
tgcttcctagcacgtagcagcgacggcctcattgatgtcacccatgcttccactgccgtc
accatcactaacaactatttctctcagcatgataaggtgatgctgcttggacacaatgat
aattttagtgcagataaaggtatgaaagtcacaatagcctttaaccgttttggggctggc
ctgattgaaaggatgccacgggtgaggtttgggtatgctcatgtggccaacaatagatat
gacgagtggaagatgtacgcggttggaggcagcgctaacccgaccattttcagtgaaggg
aactacttcatagcgcctgaaactgcttacgcaaaacaggttacaaagagagagtctgga
ggacgttggaataattggaaatggagatcttccaaggatatgttcaaaaatggtgctttt
tttgttcaatctggatatggaagctgttacccactttactctaaaactcagtcgtttaag
gtcctagatggatccatggttccggctttaacttcaagtgcaggtcctctgcgctgcttt
gttggtaaagcatgttaa
DBGET
integrated database retrieval system
