Prunus persica (peach): 18781055
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Entry
18781055 CDS
T03092
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03015
mRNA surveillance pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18781055
09122 Translation
03013 Nucleocytoplasmic transport
18781055
03015 mRNA surveillance pathway
18781055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18781055
03041 Spliceosome [BR:
pper03041
]
18781055
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
18781055
Spliceosome [BR:
pper03041
]
Common components
Common spliceosomal components
Cap binding complex
18781055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
CNOT11
Motif
Other DBs
NCBI-GeneID:
18781055
NCBI-ProteinID:
XP_007213657
UniProt:
M5WNM4
LinkDB
All DBs
Position
G4:18225359..18243015
Genome browser
AA seq
865 aa
AA seq
DB search
MSSWKSLLLRIGEKSPDYGTSSDPKEHIETCFGVLRRELEHSPNEVSQFLLQCAEQLPHK
TSLYGTVIGLLNLENEEFVRKVVENTQSNFQDALDSGNCNRIRLLMRFLTVMMCSKVIHP
SSLVVVFETLLSSAATTVDEEKGNPSWQSRADFYVTCILSCLPWGGAELTEQVPEEIERV
MVGVEAYLSIRKRVSDTGLSAFEDDDENVREPNDKDFLEDLWGRIQVLSSNGWKLDSVPR
PHLSFEAQLVAGKSHEFGPISCPDQPDLPSTISSITCGKQKHDAELIYPQRIRRLNIFPA
SKTEDLQPMDRFIVEEYLLDVLFFLNGCRKECASYMAGLPVPFRYEYLMAETIFSQLLML
PQPPFRPTYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLAELLPPK
GAPNFKFSVEETSEGNGQHALSVDLRTMVKGRASAREMIVWIEESVFPVHGMEGTLNVVV
QTLLDIGSKSFTHLITVLERYGQVIAKLCGDQDKQVMLITEIDSYWRNNSQMSAVAIDRM
MGYRLLSNLAIVRWVFSPANIEQFHLSDRPWEILRNTVSKTYNRVCDLRKEILSLKKSIV
SAEEAAATAKAELVAAESKLSLMDGEPVLGENPVRLKRLKSYAEKAKEEELSVRESLEAK
EALLARALDEFEALFLSLYKNFLNVLTERLPSASTCVTLQGLKSIHADSMAVDVEESSAM
EVDDENGRPKKSQLNGGRMSSVYNVGEKEQWCLSTLGYLKAFSRQYASEIWPHMEKLDAE
VLTEDVHPLIRKAVYCGLRRPVDGL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaagagtcttcttcttcgaattggcgagaaatctcccgactatggcacc
tcctccgaccccaaagaacacattgaaacttgctttggcgtgcttcgccgagaactggag
cactctcccaacgaagtttcgcaattccttctccagtgtgccgaacaattacctcacaaa
acttctctttatgggacagtgattggcctgttaaacttggagaatgaggaatttgttagg
aaagtagtggagaacactcaaagtaattttcaggatgccttagattctggaaattgcaac
aggattcgtcttttgatgaggttcctgactgttatgatgtgcagtaaagttatccatccc
agttctctggtggttgtctttgagacattattatcatcagctgcaacaacagttgatgag
gagaaagggaatccctcctggcaatcgagagctgacttttatgtaacatgtattttatca
tgtctcccttggggaggagcagaactcactgagcaagtccctgaggaaattgagagagtt
atggttggtgttgaagcttatttgagcataagaaagcgtgtttctgacaccgggttgtct
gcttttgaggatgatgatgagaacgtgagagaacctaatgataaggatttcttggaagat
ttgtggggccgaatacaagttttatctagcaatggatggaaacttgatagtgttccgaga
cctcacctttcatttgaagcacagctagttgctggaaagtcgcatgagtttggacccatc
agctgtcctgaccaacctgatctgccttcaacaatttctagtataacgtgtggtaaacaa
aagcatgatgcagagttaatatatcctcaaaggatacgaaggctgaatatatttcctgca
agtaaaactgaggacctgcaacccatggatcgcttcattgtggaagagtatctgctagat
gtcctttttttcttaaatggctgtcgaaaggaatgcgcttcatacatggctggcctacct
gtaccctttcgatacgagtatcttatggcagagacaattttctctcagttactcatgcta
ccgcaacctcctttcaggccaacgtattacacactagttattatcgacctctgtaaggct
cttcctggagcctttcctgcagtagttgctggtgctgtacgagctctattcgagaaaata
gctgatttagatatggaatgtcgaacgcggctcatcctttggttttcccaccacttatca
aactttcagttcatctggccatgggaagagtgggcttatgtcttagacctgccaaaatgg
gccccacaacgtgtatttgttcaggaggttctggagagagaagttcgtttatcctactgg
gacaaagtgaagcagagcattgagaatgcccctggcttagcagagttgcttcctcccaag
ggggcaccaaatttcaaattcagtgttgaagaaaccagtgaaggaaatggacaacatgca
ctttctgttgacctcagaaccatggtaaaagggagggcatctgcccgtgaaatgatcgta
tggatagaggaaagtgtgtttcctgttcatgggatggaaggtaccctcaatgtggttgtg
caaactcttctcgacattggatctaaaagtttcactcatttgattaccgtattggagaga
tatggtcaagtcattgcaaaactatgtggtgaccaggataagcaggtcatgctgataact
gagattgattcttattggaggaacaattctcaaatgagtgctgttgcaatagataggatg
atgggctaccgacttttatctaatctggccattgtcagatgggtcttttctccagcaaac
attgagcagtttcatctatcagatcgtccatgggagattttaagaaacacagttagcaag
acatataaccgtgtatgtgatctaaggaaggagattttgtctctgaaaaagagtattgta
tcagctgaagaagctgcagcaacggcaaaagcagagttagtggctgctgaatcaaagctt
tcacttatggatggtgaacctgttcttggggaaaatcctgtgaggctgaagcgcttgaaa
tcgtatgctgaaaaggcaaaggaggaggagttgtctgtacgtgaatctttagaggctaag
gaggctcttctagctcgagcccttgatgaatttgaggcattgttcctctccttgtacaaa
aacttcctgaatgtgttgacagaacgcctgccaagtgcatccacatgtgttacattgcag
ggattgaagtcaattcatgcagattctatggcagtcgacgttgaagaatcgtcggcaatg
gaggtagacgatgagaatggaagacctaagaaaagccaattgaatggtgggaggatgagt
agtgtatataatgtaggtgaaaaagagcagtggtgtctatcgactttaggctacctgaag
gccttctcgaggcaatatgcttctgagatttggcctcacatggagaagttggacgcggag
gttctaacagaagatgtgcatcctcttattcggaaagcggtttattgtggccttcgtcga
ccagttgatgggttgtga
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