KEGG   Prunus persica (peach): 18781409
Entry
18781409          CDS       T03092                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X2
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pper  Prunus persica (peach)
Pathway
pper03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    18781409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pper03400]
    18781409
DNA repair and recombination proteins [BR:pper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     18781409
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA_2 FHA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 18781409
NCBI-ProteinID: XP_007213602
UniProt: M5WNH3
LinkDB
Position
G4:complement(1219483..1224522)
AA seq 674 aa
MPRLLIGYLVPLNDKLEEDTSIPNIPLNQGPNYIGRHTTASLSDKRLSRKHLTLTASPDA
SAVLAVDGTNPIVVKSENARNKLFPKDNATIHHGDVIELIPGHYLFKYKTLSGNEDVDAH
GVHNHKRGSNDRGKGAEVEELSRKRSRKLVLQEKGSNTSFKAEVEGSSLGAENRGNLQSK
RDGGQVEAIQHFRVPNDKIPQTFRLLNVRGLPQWANTSCVSIGDVIQGDIVVAILSNYMV
DIDWLIPACPKIAKVPHVLVIHGEGDGTLDYMKRKKPANWILHKPPLPISFGTHHSKAML
LVYPRGVRIIVHTANLIFVDWNNKSQGLWMQDFPWKDQNNPSKGCGFENDLIDYLSALKW
PEFSVNFPNLGSFKINPSFFKKFDYSNAAVRLIASVPGYHTSTNMKKWGHMKLRTILQEY
TFDKEFRKSPLAYQFSSLGSLDEKWMAELASSMSSGLSDDRTPLGPGEPLIIWPTVEDVR
CSLEGYAAGNAVPSPLKNVEKDFLRKYWARWMARHTGRCRAMPHIKTYTRYNGQKLAWFL
LTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPFKTCSSGFSCTSNGVPSEDKCGRPES
SEASRTTLVTLNWHGNRNSDSSSEVIKLPVPYELPPQPYTTEDVPWSWDRRYNKKDVYGQ
VWPRHVQLYASQAS
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgcctcgccttctgataggatatttggttcctctcaacgacaagctagaggaagacact
tcaatccccaacatacccctcaaccaaggtccaaattacatcggccgccacaccacagct
tccctctccgacaaaagacttagccgcaagcacctcactctcactgcctctcctgatgct
tccgccgttttggccgtggatggaaccaatcccattgttgttaaatcggagaatgctagg
aataaattgtttcccaaagacaatgcgactatacaccatggtgatgttatagagctaatt
ccggggcattatcttttcaagtataagacactgtctggtaacgaagatgtagatgcgcat
ggtgtccataaccataagaggggttcaaacgatagaggaaagggtgctgaagttgaggag
ttgagccgaaaacggtcacgtaagctagtgctccaagagaaaggttccaatacaagtttt
aaggctgaggtggaaggaagcagcttgggggctgagaatcgtgggaatttgcagtctaag
agagatggcggtcaagtggaggcgatacagcattttcgtgttcctaatgataaaatacca
cagacctttcggcttttgaatgtgcgaggacttccccaatgggcaaatacctcttgtgtt
tctataggggacgtgattcagggggatattgtcgtggcaatcctttcgaattacatggta
gacatcgattggttgatacctgcatgcccaaaaattgcaaaagtcccgcatgtcttggtt
attcatggtgagggtgatggtacactggattatatgaagagaaagaagcctgcaaattgg
attctacacaaaccaccattgcccatttcatttgggacgcaccattccaaggccatgctt
cttgtgtatcctcgaggagtgagaattattgtacacacagcaaacttaatatttgttgac
tggaacaacaaaagccaaggtttgtggatgcaagattttccatggaaagatcaaaataat
ccaagcaaaggatgcggatttgaaaacgacttaattgattatctcagtgcacttaagtgg
ccggagttttctgttaattttcctaacttgggaagcttcaaaatcaatccgtcatttttc
aagaagtttgattacagcaatgcagcagtgaggttaattgcatctgtccctggatatcat
acgagtacgaacatgaaaaagtggggacatatgaagctacgcactattctccaggagtac
acttttgataaagagtttcggaaatctcctcttgcttatcagttctcctccctaggatct
ttggatgagaagtggatggctgagcttgcatcttcaatgtcgtcaggtttatcagacgat
agaactcccctcggtcctggggagccacttataatatggcctacggtagaagatgtcaga
tgctctctagagggttatgcggctggaaatgcagttccaagtccactaaagaatgtggag
aaagacttcttaagaaagtactgggcaagatggatggcacgccatactggccgctgtcgt
gcaatgccacatataaagacatacactcgttacaatggtcagaaacttgcttggttcttg
ctaacttcagcaaatcttagcaaggctgcctggggagctctccagaagaataattcacag
ttgatgatccgttcttatgagcttggagtgctgtttctgccgtttaaaacatgcagttct
ggattttcttgtaccagtaatggggttccgtcagaggataaatgcggacggccagaatct
tcggaagcatcaagaacaacacttgtgactctgaattggcatggaaacaggaattcagat
tcatcatctgaagtaatcaaattgcctgtgccttatgaactccctccccagccatacacc
actgaagatgtgccttggtcttgggaccggcggtataacaagaaagatgtttatggtcaa
gtttggccgcgacacgttcagctctatgcttctcaagcgtcatga

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