Prunus persica (peach): 18781760
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Entry
18781760 CDS
T03092
Name
(RefSeq) THO complex subunit 4D isoform X1
KO
K12881
THO complex subunit 4
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03015
mRNA surveillance pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18781760
09122 Translation
03013 Nucleocytoplasmic transport
18781760
03015 mRNA surveillance pathway
18781760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18781760
03041 Spliceosome [BR:
pper03041
]
18781760
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
18781760
TREX complex
18781760
Spliceosome [BR:
pper03041
]
Complex C
Other components
EJC/TREX
18781760
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
18781760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_11
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
18781760
NCBI-ProteinID:
XP_007215775
UniProt:
M5WTH1
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All DBs
Position
G3:complement(17966581..17973610)
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AA seq
284 aa
AA seq
DB search
MSTALDMSLDDMIKNSRGNRERTRGGRAPRGRGGPRGSFNAGRMAAGRIPGGRMTGAVRR
GPLPVNTRPSSYTIAKSTRRTKRFPWQPDLFEDSIRAAGISGIEIGTKLYVSNLDYGVTN
EDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE
IVGANAGMPISARVNVTGVHGRKKRTVVMTPGPGRGGGYALPMVNRGSGRSSRGGIRNGR
GQPRGSGSGRGRGRSGPGRKKPVDKSVDELDKELDSYHADAMQS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgctttggatatgtcgcttgatgacatgattaagaacagcaggggtaatcgt
gagagaactagaggtggtagggcccctcgtggccgtggtggaccacgtgggtcctttaat
gctggaaggatggcagctggaagaattccaggtggaagaatgacaggagcagttcgtaga
ggtcctctcccagtgaatactcggccatcctcgtataccattgccaagtctacccgccga
accaagcgtttcccatggcaacctgatttgtttgaagacagcattagagctgcggggata
tcagggattgaaattggcacaaaattatatgtttccaacttggactatggagtgacaaat
gaggatataagggaacttttctctgagatcggagagctgaaacgatatgcggtacatttt
gacaaaaatggccgtccaagtggttctgctgaagtggtttatactagacgaagtgatgca
tttgcagcattgaagcggtataataatgtcctattggatgggaagcctatgaagattgag
attgttggtgccaatgcagggatgcctatttcagctcgtgtgaatgtgacaggagtgcat
ggaaggaagaaaaggactgttgtaatgacgcctggacctggtcgtggtggtggctatgct
ttgcctatggttaatcgtggttctggcaggagcagtcgtggagggatcagaaatggtcgc
ggccaaccacgtgggagtgggagcggccgtgggcgtggtcgcagtgggccagggaggaag
aagcccgttgataagtcagttgatgaacttgacaaggaactcgatagctaccatgcagat
gccatgcaatcttag
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