Prunus persica (peach): 18781881
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Entry
18781881 CDS
T03092
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pper
Prunus persica (peach)
Pathway
pper03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
18781881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18781881
Enzymes [BR:
pper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
18781881
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
18781881
DNA repair and recombination proteins [BR:
pper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
18781881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
18781881
NCBI-ProteinID:
XP_007215481
UniProt:
M5XC62
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All DBs
Position
G3:complement(6731631..6735650)
Genome browser
AA seq
403 aa
AA seq
DB search
MPELPEVEAARRAIEENCLGKKITKALIADDPKVIDGVSRADFEASLLGKTIVSAHRKGK
NLWLRLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDTDEWPSKYSKLFVELDDGLEF
SFTDKRRFARVRLLKDPASVPPISELGPDALLEPMTGDELFESLSKKKIAIKTLLLDQSY
ISGIGNWVADEVLYQARIHPEQSAASLSKENYGNLHKSIKEVIEKSLEVGADSSQFPSNW
IFHSREKKPGKAFVDGRKIDFITVGGRTTAYVPELQKLSGQQAARAGSKQANKRKGHGDG
VKDDVNEAASDEEVNGSVQSKKGRKPRGQGNKSSAKRKSKESDDEDNANDSEDDDDDDND
DHHDEDQKNKTRKVTNNKQSKVEKTSKKTVQTSQNSKKKKKAK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctaccggaggtggaggcggcgcggagggccatagaggaaaactgtctgggg
aagaagataacgaaagcgctcatcgccgatgaccccaaagtcatcgacggagtttctcgc
gctgacttcgaggcgtcgctcttgggaaagaccatcgtctctgctcaccgcaagggcaag
aacttatggctccgcctcgactctcctcctttcccttccttccaattcgggatggcgggt
gctatatatattaaaggggtcgcggtcacgaaatataagaggtctgctgtaaaggacact
gatgagtggccttccaagtattccaagttatttgttgaactggatgatggtctggagttc
tctttcactgacaagaggcgatttgctagagtccgcttgctcaaagatccagcatctgtg
ccccccatatctgagcttgggcctgatgctctcttggagcctatgacaggggatgaactt
tttgaatccttgagcaagaagaaaattgcaattaagactctattgcttgatcagagttac
atttcaggaattggaaattgggttgctgatgaagtactataccaagcaagaattcatcca
gagcaaagtgctgccagcttgtcgaaagaaaattatggaaatttgcacaagagcatcaaa
gaggttatcgaaaaatcacttgaagttggggcagatagtagtcaatttccaagtaattgg
atttttcattcccgtgaaaagaagcctggaaaggcttttgttgatgggaggaaaattgac
tttatcacggttggtggcaggactacagcgtatgtaccagagcttcagaagttaagtgga
cagcaagctgccagagcagggagtaaacaagctaacaagagaaaagggcatggtgatggt
gtcaaggatgatgttaatgaagcagcgagtgatgaagaagttaatggaagtgtgcagtca
aagaaagggaggaagcctagaggtcaaggtaataagtcatcagctaaaagaaaatctaaa
gagagtgatgatgaagacaatgccaatgacagtgaggatgatgacgatgatgacaatgat
gatcatcatgatgaagatcaaaagaataaaacaagaaaagtgaccaataataagcaatcc
aaggtggagaagacatcaaagaaaacagtccagaccagtcagaatagtaagaagaagaag
aaagcaaaatag
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