Prunus persica (peach): 18782263
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Entry
18782263 CDS
T03092
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18782263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18782263
Spliceosome [BR:
pper03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
18782263
Complex C
U5 SnRNP specific factors
18782263
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
18782263
NCBI-ProteinID:
XP_020416175
LinkDB
All DBs
Position
G3:6559791..6570385
Genome browser
AA seq
2347 aa
AA seq
DB search
MWNNGQIAPPGTGGSSIPPPPAAQPSYTVLPSPADAEARLEEKARKWQQLNSKRYSDKRK
FGFVESQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVYLGALKFVPHAVYKLLENMPMPW
EQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFD
DEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLS
LPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDE
DWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMVMYIKTEDPDLPAFY
YDPLIHPIPSTNKERREKKTFDEEEDDVFGLPEGVGPFLQDTQLYTDTTAAGISLLFAPR
PFNMRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKK
KHLFRSLQATKFFQTTELDWAEAGLQVVXAGLYMLNLLIHRKNLNYLHLDYNFNLKPVKT
LTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYTFSHVGQLT
GMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLE
RWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTI
LQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDK
TVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPP
LSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQR
AFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPP
LLVYKWCQGINNLQSVWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYV
TAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPN
EFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYN
NKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSM
CGFEVRILPKIRMSQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQIL
MSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMP
SRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNL
YRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRH
TLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHT
LFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVY
VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIET
VQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAEPKDVFDQKASNKYWIDVQLRW
GDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLQQ
AMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRV
TIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAAL
VRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILK
ATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTVITEPHHIW
PSLSDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAE
IEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQNAFGSKTDWRVRAISATNLYLRVN
HIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVKEIRCIAMA
PQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTTHAKILENTKQWDG
EKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFL
GFYMIPDTGPWNYNFMGVKHTPSMKYGIKLGTPREYYHEDHRPTHYLEFSNLEEGDTVEG
DRDDTFT
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacggccagattgcgccgcctggcaccggcggttcgtcgatcccgccaccg
ccggcggctcagccctcttacacggtattgccttccccggctgatgccgaggccaggctc
gaagagaaggcccggaaatggcagcagctcaattccaagcggtacagtgataagcgcaag
ttcggctttgtcgagtcgcagaaagaggacatgcctcctgaacatgtcaggaagatcatt
agagaccatggggacatgtcttcgaagaaatttcgtcatgataaacgagtgtatctagga
gcacttaaatttgttccacatgcagtctacaagctccttgagaatatgccaatgccatgg
gagcaggtccgtgatgtgaaggtcttgtatcatataaccggggcaattacatttgtgaat
gagataccctgggttgttgaacccatctatttggctcagtggggtacgatgtggattatg
atgagaagagagaagagggatcgtcgacatttcaaaagaatgcggtttccgccatttgat
gatgaagaacctccattagactatgctgataatctgttagatgttgatcccctagagcca
attcaactggagttagacgaagaagaagattccgctgtgtatacttggttttatgaccat
aaacctcttgttaagacaaagctcattaatggtccaagttatcggaagtggcatctttcg
cttccaatcatggcaacccttcatcgacttgcaggacagctactttctgatttgattgac
cgcaattatttttacttgtttgacatggagtccttttttacagccaaagcactgaatatg
tgcatccctggtggacctaaatttgaacccttgtatcgggatatggagaaaggggatgag
gactggaatgagttcaatgacattaataaactcattattcggtcacctctcagaacagag
tacagaattgcattccctcatctctacaacaatagacccaggaaggtaaagctttgtgtg
tatcacacacccatggtgatgtacataaaaaccgaggatcctgatctacctgcgttttat
tatgatccattgatacacccaatacccagcaccaacaaggagcggcgtgagaagaaaact
tttgatgaggaggaagatgatgtttttggtttaccggagggggtgggaccatttctgcaa
gatactcagctttatactgacaccacagctgctggaatctccctcttgtttgcgccacgc
ccttttaacatgagatctggtcggacacgtcgagcagaagatataccccttgtgtcagag
tggtataaggaacattgtcctccgtcgtatccagttaaagttcgggtcagctatcagaaa
ttgctgaagtgttttgtgttgaatgagctacatcatagaccacctaaggctcaaaagaag
aaacatttgtttcgatctcttcaagctactaaatttttccagactacagagcttgattgg
gctgaagcgggtcttcaagttgtannagcaggattatacatgctaaatctattgattcat
aggaaaaatttgaactaccttcatcttgattataattttaatctgaagcctgtgaaaaca
ctgacaacaaaagagcgtaagaaatcccggtttggtaatgcttttcatctttgccgtgaa
atcttgcggttgacaaagcttgtagttgatgctaatatccagttccgtttgggtaatgtt
gatgccttccaattggctgatggcttgcaatacacattttctcatgttggtcagttgact
ggaatgtaccgttacaagtataggttgatgaggcagattagaatgtgcaaggatttgaag
catttgatttactatcggttcaatactgggccagttgggaaaggacccggatgcgggttc
tgggcaccaatgtggagggtatggttgttcttccttcggggcatagttcctcttctagaa
cggtggttgggaaatttacttgcaaggcaatttgaagggcggcattcgaaaggcgtggca
aagactgtaactaagcagcgtgtcgaaagccattttgacttggagcttcgagctgctgtc
atgcatgacgttcttgatgccatgccggagggcatcaagcaaaacaaggcaagaactatc
ttgcaacatctgagcgaggcgtggcgttgctggaaagcaaatattccttggaaggttcct
ggtttgccagttcctattgagaatatgattcttcgttatgtcaaatcaaaggcagactgg
tggacaaatgttgcccactataatcgcgagcgcataagaagaggtgctacagtagataag
acagtttgtcggaagaatcttggaagattaactcgcctttggctaaaggcagagcaggag
cgacagcacaattatctgaaagatggtccatatgttacacctgaagaggcagttgcaatc
tacacgacaaccgtgcactggttggagtcgagaaagttcagccccattccgttccctcca
ttgtcatacaaacatgatacaaagctacttatccttgctttggagaggctgaaggaatct
tatagcgtggctgtaagattgaaccagcttcaaagagaggagctgggtctcattgaacaa
gcctatgataatccacacgaggcattgtcacgaattaagcgtcacttgctcactcagcgt
gccttcaaagaagtcggtattgagttcatggatttgtatagctatcttattccagtttat
gagattgaacctcttgagaagattacggatgcatatcttgatcaatatttatggtatgag
ggtgacaaacgtcatctctttccaaactggatcaagcctgcagattctgagccacccccg
ctcttggtttataaatggtgtcagggaataaacaatttacagagcgtatgggacacaagt
gaggggcagtgtgtggtgatgcttcaaacgaagtttgagaagttctttgaaaagattgac
ttgacaatgctaaataggcttctacgtcttgtccttgatcataatattgctgattatgtc
actgcaaaaaacaacgtggtattgtcttacaaagatatgagtcatacaaattcttatggt
cttatacgtggtcttcagtttgcatcgtttgttgtacaatattatgggcttgtgttggat
ctgttgcttcttggattgactcgagccagtgagattgctggtccaccccaaatgccaaat
gagttcatcacttattgggacacaaaggttgagactcggcatcctatcaggctgtattct
cgatacatagacagggtgcatatcttgttccgcttcactcatgaagaggctcgggacctt
atccagcgatatctgactgagcatccagatcccaataatgaaaatatggttggatacaat
aataagaaatgctggccaagagatgctcgaatgaggctcatgaaacatgatgtcaatctt
ggaaggagtgttttttgggatatgaagaaccgtcttcctcgaagtatcaccactttggag
tgggaaaacagctttgtttctgtttacagtaaggataatccaaatttgcttttcagcatg
tgtgggtttgaagttcgaatacttcccaagataagaatgagtcaagaagcatttagcaac
acgagggatggggtctggaatttgcagaatgaacagacaaaggagaggactgcagttgct
ttcttacgggttgatgatgaacacatgaaggtgtttgaaaatcgtgtgaggcagattctt
atgtcttcagggtctacaacatttacaaaaattgtcaacaaatggaatacagcacttatt
ggtcttatgacttatttccgtgaagcaactgtacatacacaagagctgttggatttgctg
gtcaagtgtgaaaataaaatacagacccgtattaagattgggttgaattcaaagatgcct
agcaggtttccgcctgtcattttctacacaccaaaagaaattggaggacttggtatgtta
tctatgggtcatatattgattccacaaagtgacctccgatacagtcagcagacggatgtt
ggtgtgactcactttaggagtggaatgagtcatgaagaggaccagctgattccaaatctt
taccggtacatacaaccatgggagagtgaatttatagattcacagcgtgtttgggcagaa
tatgcactgaaaaggcaggaagctcaggcacaaaataggcgtctaacgcttgaagatttg
gaagattcatgggataggggaattccacgaataaatactttgttccagaaggacaggcac
actttagcatatgacaaagggtggagagttcgcacagattttaagcagtaccaagtcttg
aaacagaatcctttctggtggacacaccagaggcatgatggaaaattatggaacttaaac
aactaccgaactgatgttattcaagcccttggaggtgttgagggaatccttgagcataca
ttattcaaaggaacatactttcctacttgggaggggctcttctgggagaaggcatctggt
tttgaggagtcgatgaagtataagaagttgaccaatgcacaaagatctgggctcaaccaa
atccccaatcgtaggtttactctttggtggtcacctaccataaatcgtgccaatgtttat
gtcggtttccaagtgcagctagatttaactggaatcttcatgcatggcaagattccgacc
ttgaagatttcactgattcagatattccgtgctcacttgtggcagaagattcatgaaagt
gttgtcatggatctctgtcaggttttggatcaagagttggatgcgttggaaattgaaaca
gtgcagaaggaaacaatacatcccaggaagagttacaaaatgaacagctcctgtgctgac
attcttctgtttgctgctcatagatggccaatgtcgaaacctagtctagtagctgagcca
aaggatgtgtttgatcagaaagctagcaacaagtactggatagatgtacaactccgttgg
ggtgactatgattcccatgatattgagcgttacacccgagctaagtttatggactatacc
actgacaacatgtctatctatccttctcccacaggggtgatgattggtctcgatttggct
tataatttgcattctgcatttggtaactggtttcctgggtcaaaacccctgcttcagcaa
gcaatgaacaagatcatgaaatcaaatccagccttgtatgtgctgagggagcgaataagg
aaaggattgcagctctattcttctgagcccacggaaccatatttgtcatcccaaaactat
ggagagatcttcagcaaccaaattatttggtttgttgatgacacaaatgtttatcgtgtt
acgatacataaaacatttgaaggaaatctcacgacaaaacccatcaatggagctattttc
atattcaatccaaggactggtcagctgttcctgaaggttatccacacaagtgtctgggca
ggacagaagcgtcttggtcaattggccaagtggaaaactgctgaagaagttgctgcactt
gtgcgctctctgcctgttgaagaacagccgaagcaaattattgtgactcgtaagggaatg
ttggatccattggaggttcatttgcttgatttccccaacatagtcataaaaggaagtgag
ctgcagcttcctttccaggcttgtctgaagattgagaaatttggtgatctgatattgaag
gcaactgaaccgcagatggttctgttcaacatttatgatgattggttgaagagtatttca
tcatacactgcattctcccgactaattctgattcttcgtgcacttcatgtaaacaatgag
aaggcaaagatgttattgaagcctgataaaacagtcattactgagccacaccacatctgg
ccttctctttctgatgatcaatggatgaaggttgaggttgctctaagggatctcatatta
tctgactatgcaaaaaagaacaatgtgaatacatcggccttgacacaatccgagatccgt
gacattatacttggagctgagatcactccaccttctcaacaaaggcagcagattgcagag
atagaaaaacaggctaaagaagccagtcagctgacagcagtcacaacaaggactacgaat
gtgcatggtgatgaactcattgtcaccactacgagtccctatgagcaaaatgcttttggt
tccaaaacagattggcgtgtcagggcaatatcagccacaaatctatatcttcgtgtcaat
catatatatgtgaattcagaagatataaaggaaacgggttacacctatattatgccgaag
aacattttgaaaaaattcatctgcattgcggatctgaggacacaaattgccggttatttg
tatgggataagccctcctgacaaccctcaggttaaggagattcgttgcattgccatggca
ccacagtgggggacccatcagcaagttcatcttccatcagctcttcctgagcatgatttt
ctcaacgacttggaacctttgggatggatgcacacgcagccgaatgagcttcctcagctt
tctccacaggatctcaccactcatgcaaagattttagagaacaccaagcaatgggatggg
gagaaatgcatcatcttgacctgcagtttcactccaggttcctgctcgttaactgcatac
aaacttactccatctggttatgagtggggacgtgtcaacaaagacaccggaagcaatcct
cacggataccttcccactcattatgagaaggtccagatgcttctcagtgaccgcttcctt
ggtttctatatgattccggacactgggccatggaactacaacttcatgggggtgaagcat
acgcctagcatgaagtatggcatcaagcttgggacccctagggagtactatcacgaggac
catcggccgacccattaccttgagttcagcaacttggaggagggtgacacagtggagggt
gatcgcgatgataccttcacgtaa
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integrated database retrieval system
