Prunus persica (peach): 18782439
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Entry
18782439 CDS
T03092
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pper
Prunus persica (peach)
Pathway
pper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
18782439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18782439
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
18782439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
18782439
NCBI-ProteinID:
XP_007217691
UniProt:
M5XIM6
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Position
G3:17988839..17997214
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AA seq
927 aa
AA seq
DB search
MRSKNETKRSKESSSGTLADVSLEAVGKLLRRCNKTGRKKFENSLRQCDSIGKSESGAKR
DEEDVDSRVRGNSLETAGGSKDAKKKVSWEEKVDRESFQCSFTDTKEELDDADWEDGPVP
ILNSVGDHEVTIELNETPDSTRRKRIRRASAEDKELAELVHKVHLLCLLARGRLIDRACD
DALIQATLLSLLPVHLLHISKVAKPTVKDLRPLVFWFQNNFRVRSTSVSKSFYSALTFAL
ETHEGTQEEIAALSVALFRALNLTTRFVSILDVASLKPDADKTEYSSEDASRSSRGIFST
STPMVARKQDVSVSLGKSPSCNERDNVCGTSQMGSCRSKDCHPTSNNTPPKGSCNAYEVN
DRMLDTLACGAHHDISEAVLNKKSQGLKRRGDLEFEMQLKMALSATAVPTADREMGSGVN
YLNGNENFSYSKRMKRIVSEESRNSSQSISTAVGSRKVGSPLYWAEVYCKGENLTGKWVH
IDAINAIIDGEQNVEALAAACKTSLRYAVAFAGNGAKDVTRRYCLKWYQIASQRVNSIWW
DAVLAPLRDFEVTATSGSVHLEKEHTGSSSGHEQAKSLNISDRAVIATRNSLEDMELETK
ALTEPLPTNQQAYKNHQLYAIEKWLNKDQVLHPKGPIVGFCSGHPVYPRTCVQTLKTRER
WLREGLQVKINEHPVKELKRSSKVHKVQDPESDNYVGGNSKRTIELYGKWQLEPLDLPHA
VNGIVPKNDHGNVEVWSEKCLPPGTMHLRLPRVFYVAKRLEIDYAPAMVGFEFKNGQSYP
VFDGIVVCAEFGDAIVEAYAEEEERREAVEKKRNEMQAISRWYQLLSSVVTRQRLENLYG
DSSSSVASVSTKSVNGKLDVQVDGSPNDEQSLACQQDVHENRPAGPSAAMPENHEHVFLT
ENQSFDEDNLVVTRRCHCGFTVQVEEL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcaaaaacgagactaagcgttctaaagaatcgtcatcaggaactcttgccgac
gtatcactggaggctgtgggcaaacttctgaggcgttgcaataaaactgggagaaaaaaa
tttgagaatagtctgcgtcaatgtgattcaattggaaagtcagagagtggggcaaagaga
gatgaagaagatgtggattcaagagtcagagggaatagtttggaaactgcaggtggaagt
aaagatgcaaagaaaaaggtctcttgggaagagaaagttgatcgggaaagctttcagtgc
agttttacggacactaaggaagaactggatgacgcagattgggaagatggcccagttccc
attttaaattccgtgggcgatcatgaagtgactattgaattaaatgagacaccagattct
acaagaaggaaacgtattcgtcgggcttctgccgaagataaggaattggctgagcttgtt
cataaggttcatttactttgtttactcgcacggggaagattgattgatagagcttgtgat
gacgctcttattcaggctactttactttctcttcttccagtacacttgctgcatatatca
aaggttgcaaaacctactgtaaaggatttgcgtcccctagtcttttggtttcaaaataac
ttccgtgttagaagtacaagtgtgagcaaatcattttattcggctctgacttttgctctt
gaaacccatgaagggactcaagaagagattgctgcgttgtctgtggcactctttagagct
ttaaatctgacaacccggttcgtgtccattttggatgttgcctccttaaaaccagatgct
gacaagactgaatattctagtgaagatgcaagcagatcaagtaggggaatattcagtact
tcaactccaatggtggctagaaaacaggatgtctctgtgtctcttggtaaatcaccttca
tgtaatgagagagacaatgtctgtggaacttctcagatgggttcatgcagaagtaaggac
tgccacccaacaagtaacaacactccgcccaaaggttcttgtaatgcttatgaggtgaat
gatagaatgctagatacattagcttgtggggcacatcatgatatctcagaagcagtcctt
aataagaaatcacagggattaaagaggagaggggatcttgagtttgaaatgcagttgaaa
atggcactttctgctacagcagtgccaactgcagatagagaaatgggttcgggtgtgaat
tacttgaacggtaatgaaaatttctcttactcaaaaagaatgaaaagaattgttagcgaa
gaatcacgaaactcgtcccagagtatctctactgcagttggatcgagaaaagtaggttct
cctttgtattgggcagaagtatactgcaagggggaaaacttgactggaaagtgggtgcat
attgatgctattaatgcaattattgatggagaacagaatgttgaagctctagctgcagca
tgcaaaacgtctttgcgatatgctgttgcttttgctgggaatggggctaaagatgtgact
cgcaggtactgtctgaagtggtatcagatagcatcccaacgagtcaattcaatatggtgg
gatgcggtattggcaccgttgagagatttcgaggtgacagcaacaagcggcagtgtccat
ttggagaaagaacacactggatcctcatcgggacatgaacaagctaaatccttaaacatc
tctgacagagcggttattgctactagaaactccctcgaggatatggagttggaaactaag
gcattaactgagcctcttccaactaatcagcaggcctataaaaaccatcaactatatgct
attgaaaaatggcttaacaaggatcaggtacttcatccgaagggccccattgtgggtttt
tgttcaggtcatccagtttaccctaggacatgtgtgcaaacactaaagacaagagaaaga
tggctacgggaggggctgcaagttaaaatcaatgagcatcctgtgaaggagttgaaacgt
tcttcaaaagtccacaaagtacaggaccctgaatctgataattatgttgggggaaattca
aaacgaactattgaactttatggcaagtggcaacttgaacccttggatctgcctcatgct
gttaatgggatagtgccaaagaatgatcacggtaatgtggaagtatggtctgagaagtgc
cttccgccagggactatgcacttgaggttgccaagggtgttttatgttgccaagaggctg
gaaattgattatgctccagccatggttggtttcgaattcaaaaatggtcaatcatatcct
gtctttgatggtatagtagtatgtgctgagttcggggatgcaatagtggaggcatatgca
gaggaagaggaaagaagagaggctgtagaaaagaaaagaaatgaaatgcaggctatttcg
cggtggtatcagcttctctcttccgttgtaactcggcaaaggttagaaaacctctatggg
gattcctcctcatctgtagcatcagttagcaccaaaagtgtgaacggtaagttagatgta
caggttgatggtagtccgaatgatgagcaatctcttgcatgccagcaagatgtgcatgaa
aataggccggctggtccgtcagctgccatgccggaaaaccatgagcatgtattcttgaca
gaaaaccagagttttgatgaggacaacttggtggtgacaaggaggtgtcattgtggattc
acggtgcaagtggaagaactgtag
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