KEGG   Prunus persica (peach): 18782733
Entry
18782733          CDS       T03092                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pper  Prunus persica (peach)
Pathway
pper03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18782733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pper03041]
    18782733
Spliceosome [BR:pper03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    18782733
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_WDR19_1st PRP4 Beta-prop_WDR41 Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SCAP WD_LRWD1 WD40_like Tricorn_2nd Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WDR54
Other DBs
NCBI-GeneID: 18782733
NCBI-ProteinID: XP_007215388
LinkDB
Position
G7:complement(8728540..8732557)
AA seq 529 aa
MTMEEDKPSTTVAEPSVAAVPIAPVRPPVPRPPAPQNGEARASTSDSDSDSAGPPRATGV
SGAEYEISEESRVVRERQEKAIQELLMKRRASALAVPTNDMAVRARLRRLGEPITLFGER
EMERRDRLRMIMARLDSQGELEKLLKVHEEEEAAASAALEDGDDQMVQYPFYTEGSKALM
NARIDIAKYSIKRAASRLERARRKKDDPDEDMDAELDWALRQASSLELDCSEIGDDRPLS
GCSFSHDGKLLATCAISGVAKLWSMPEAKKFATLKGHTERLTDVKFSPVHNLVATASADR
TAKLWNTEGSQLVTFKGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETSEELLLQEGH
SRSVYGIAFHPDGSLVASSGLDALARVWDLRTGRSILALEGHVKKVLALSFSANGYYLAS
GGEDNTCRIWDLRKKKSIYIIPAHSNLISQVKFEPQEGYFLVTASYDLTTKIWSARDFKP
VRTLSGHEAKVTSLDIAGDGHQIATVSHDRTIKLWSSSTNEKDQAMDVD
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgactatggaggaggataaaccttcaacaactgtagcagagccatctgttgcagcagtc
ccaattgctccagttcgacctcccgtaccgaggccgcctgcgccacaaaatggtgaagcg
agggcgagtacgagcgactctgattccgattcggcgggccctccccgagccaccggcgtt
tcgggtgccgaatacgaaatatcggaagagagcagagtggtgagagagcgacaggagaaa
gcaattcaagaactgttgatgaagcgccgtgcttctgctcttgctgttcccactaacgac
atggctgtgagggctcgtcttcggcggctcggcgaacccattactctttttggagaaaga
gagatggagaggcgagacaggttgaggatgatcatggcaaggcttgattcgcaaggcgag
ttggagaagttgttgaaagttcatgaggaggaggaggctgccgcttctgctgcattggaa
gatggtgatgatcaaatggttcagtaccctttttacactgaaggatccaaagctttgatg
aatgcgagaatcgacattgcaaagtactccattaagagggcagcttcgcggcttgaacgg
gctcgaaggaagaaggatgacccagatgaggatatggatgcagagttggactgggctttg
aggcaggcatcaagtttggaacttgattgtagtgagattggggatgataggccactttct
ggttgttctttctcacatgatggaaaactgcttgccacttgtgctataagtggagttgcc
aagttgtggagcatgccggaagcaaagaagtttgccaccttgaagggacacacagagcgc
ctgactgatgttaagttttctcctgtgcataacctcgtagcaactgcttctgctgaccgg
actgcaaagttgtggaacactgaaggatctcagctggtgacatttaagggccatttggac
cgtcttgcacgtattgccttccatccatcaggaaaatatttaggtacaactagctttgac
aagacttggaggctatgggatgtagaaactagtgaagagttgcttcttcaagaaggtcac
agtaggagtgtctacgggatagcattccaccctgatggatcattagtggcatcttctgga
ctggatgcacttgctcgtgtttgggacctccgtacgggtagaagtattcttgccttggaa
ggccatgtcaagaaagttctagcactcagtttctcagcaaatggctattatttagccagt
gggggtgaagacaacacttgcaggatttgggatttaagaaaaaagaaatccatatacatc
attccagcacattccaatctcatatcacaggtcaaatttgagcctcaagagggatatttc
ttagtaactgcttcgtatgatttgacaacaaagatatggtcagcccgagattttaagcct
gtcaggacgctctctggacatgaagcaaaagttacttctttggatattgcaggagatggg
catcaaattgctactgtatcacatgaccgaaccatcaaactgtggtccagcagtaccaat
gagaaggatcaggcaatggatgtagattag

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