Prunus persica (peach): 18782920
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Entry
18782920 CDS
T03092
Name
(RefSeq) protein RST1
KO
K27498
focadhesin
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18782920
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
18782920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
18782920
NCBI-ProteinID:
XP_020414413
LinkDB
All DBs
Position
G3:complement(26053965..26065825)
Genome browser
AA seq
1847 aa
AA seq
DB search
MDSYTPLLEKTRVPQPSLQKYAVISIFLKLRSAPKYLDFESEPGREAISQCLHSTSPAVV
DQSVRELCSLVTDSKIDISRGLLELQSALEGSGPKFVDLFVKGLGYLVRLGFQRSNGKWS
FSATETHPFVKVLSCRPDAESELVQQVLLFMAHNKQLGMVEVCEFLRSFLNYSILRVPFL
DTSSLFARHLISSMASLCCSIPLEAMPVLKMLTDCLPFVPHKNSQDFRNFIYFAECMVDA
YTVVLRHLAGTGSLIAEAHLCGLELFEKILSISSAAHMHSGLIEPILELSKHLLFAQKDI
GLHYVPKLSSAMLTLFIILVQSELEHEQLSTLKLLHLLLKWKYGNEYVVDRTACVLSEEL
LFIFPVISLLSSPSKYVKGAATDLLAMLEKLLVTVLIAPTHKPSKEAGYPSLSTPGSIVF
RILRHLWFQDPYSSSSFFLNFASSGKTDGKEIHDVSRSWASELREYTLWIVERQKSSLPL
SQPQERFITGMPLLLCAISGVLVMHQSLGSTALDSLAAIATMDPKVGAQLLLAILFYNNM
FTRKDISCCTMLPKLLTMLPALATHSMMIPLVVQTILPMLQKDAKPTLYATAIRLLCQTW
ETNDRAFGSLQGVLLPKGFTELKFERNICISMAASIRDVCRKNPDRGVDLILSVSSCIEN
KDPVIQALGFQSLAHLCEADIIDFYTAWDVIAKHVLDYREDTILAHSICLLLRWGAIDAE
AYPEASKNVLQILWSVSISGHPGLESQWAKARASSLEALAQYEISHIEQNIQDFKKRTTE
LLFSETNITVLRAMEELQVKIITYEHLTRRRLVKEKRVSGSKIEKLLDVFPQVIFSSGKR
SDTRELPGAALLCLSFTPKDVNTLGTSKGLRDVHAGYEKALLEIASSLQLSRNIFIALIS
LQSWKPFVRRWVRADVLSFDAKVPSVFLDKTAKAASDILKSMIKAAEEAIPRSAENIALA
IGALCVVLPPSAHTVKSDASKFLLNWLVQHEHEHRKWSAAISLGLISSCLHVTDHKQKFE
NITGLVEVMCSSNSTLVRGACGLALGFSCQDLLTRVDAGDNSDVDKETGKMTEADLLGMI
VKALSLLIGQLTQLPSDVMESLSAYFPPNTFGIDMNITAELSHENSDDSLEDIWGVAGLV
LGLASSVGALYRAGAHDAVLKIKDLIISWIPHMTTSVQGSRSFSGVSEIVLSVGSCLALP
IVVEFCQRLELIDDNEVRHLVNGYRELISELLSVKKSGTFYHSLLMASCIGAGSLIACIL
NGGLHSLEVEHVKGLLELFRKCYSNPYPPLVHLSGMLGVVNAMGAGAGILVDMYPPTSMQ
TAYEHKESRYLMGPLLSSPTCKQHLTSLMQDIFLVAQNSDDHQLQQYAAWAVSFLRNHLF
SINSDGGGSKSVSQSFADDSLVLKLSSWLMHLNSAETGSVAHVGTVITVIRCLSQAPRLL
TLDWGTIIRRCMRYEAQVAELFPTESSLEKGTLREECVKFSLAHANKFDQLLSFLDELSD
LSRFRTLELKLQSCLLDHLVDLIKVFSGSRLEKLFDDVRSYFSSVTSYQSHGTDETSLLR
ISCWKGFYQCLDEASLDSLEYISHIEKGMEVLFSLMPAMQLPAIGGVGQLRTVEEWSEAV
RCFRKARKSWLLDFLQVSQEDLQQRDGQLIEVLKKVQTKAKLVRIGSIPLTELGRLKAWI
LNTESNGMWDALVDVVAALQHADGSVKRQWLVDAVEISCVSSYPSMALQFLGLLSGSWSK
YMPLLILDQLTVLSDLPVTLSSLLSDSSWGGVAEFVVPSLFASTERIYNWAIHIARCEDM
PPDMQPIDKSENSMAVFLLRVMHCTCVSLKDYLPLEKQLKLANMVVA
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtacactcccttgctggagaaaacccgggttcctcaaccgtcgctccaaaaa
tacgccgtaatctcaatcttcttgaagctccgatccgccccgaagtatttggacttcgag
tccgaacccggaagagaagccatttctcagtgcctccactccacctccccagctgttgtt
gaccaatcggttcgcgagctatgcagcctcgtgacggactccaaaatagatatctctcgc
gggttactagagctccagtccgcactcgaaggatcaggcccgaagttcgtcgaccttttc
gtcaaagggttggggtatctagttcggttagggtttcagaggagcaatggcaagtggtcg
ttcagtgccacggagactcacccctttgttaaggttctgtcatgccgacccgacgctgag
tctgaacttgtgcagcaagttttattgtttatggcacataataagcagttgggaatggtg
gaagtatgtgaattcttaagatccttcttaaattattcaatcttaagggtaccttttttg
gacacttcatccctgtttgcaaggcatctaatatcatcgatggcctctctttgttgctca
attcctcttgaggcaatgccagtccttaaaatgttaaccgactgtcttccattcgttccg
cacaagaattcacaagattttaggaatttcatatattttgcggaatgtatggtggatgca
tatacagtggttctgaggcatttggcaggaactggatcgctgattgctgaggctcatctc
tgtggtttggaactgtttgagaaaattctttcaatttcttcagctgctcacatgcactct
ggtttgattgagcccatacttgaactgtccaagcacttattgtttgcccagaaagatatt
gggttgcattatgtgcctaaattatcatcagctatgcttaccttatttattatcctcgtt
cagtcagagcttgagcatgaacaactttctacattgaaacttctccaccttctcttgaag
tggaagtatggaaatgaatatgttgttgacagaacagcatgtgttctgagtgaggagctt
ttattcatatttcctgtcattagcctactgtcgtctccttctaagtatgtcaaaggagca
gctacagatttgcttgccatgttagaaaagctcttagtaacagttttgatagcaccaacg
cataaaccaagcaaagaagcaggatatccatccctaagcacacctggatctattgttttt
agaatcttacggcatctatggtttcaggatccttattcatcgtccagtttcttcttaaat
tttgcttctagtggtaaaactgatggcaaagagattcatgacgtatcaagatcttgggct
tctgaactacgagagtacactttatggattgttgagagacaaaagtcctccctacctctg
tctcagcctcaagaaagattcataactggaatgcccttgttactctgtgccatttctggt
gttttagtgatgcatcagtcgctggggagcactgctctagattctttggctgctattgct
acaatggatcctaaagtgggagctcaactattgctggctatcctattttacaataacatg
ttcactagaaaagatataagttgctgtactatgttgccaaaacttttgacaatgcttcca
gctcttgctacacactctatgatgattcctcttgtagttcagactatcttaccaatgctt
cagaaggatgccaaaccaactttatatgcgacagccattcgtttactttgtcagacgtgg
gagaccaatgaccgtgcctttggaagtttgcagggagtgttgcttccaaaggggttcact
gaattaaagtttgagagaaatatatgcatcagtatggccgcatcaattcgggatgtttgt
agaaaaaatcctgataggggcgtggacctcatcttgtctgtttcgtcttgcattgagaac
aaagatcctgtaattcaagctcttggttttcaaagtcttgcccatctatgtgaagctgac
ataattgatttttatacagcctgggatgtcatcgccaagcatgttctggattatcgggaa
gacacaattcttgctcacagcatttgccttcttctgaggtggggtgcaattgatgctgaa
gcatatcctgaagcctcaaagaatgtcttgcaaatcttgtggagtgttagcatctctggt
caccctggtctggagtcacaatgggccaaggcaagggcctcttccttagaggccttagcc
caatatgagatatcacatattgaacagaacattcaagatttcaagaaaaggaccacagag
ttgcttttttctgaaacaaatattactgtactgagggccatggaagaacttcaagtcaag
atcataacatatgagcacctcacaaggcgaagattggttaaagagaaaagggtttcagga
agtaagatcgagaagctgctggatgtgtttcctcaggtgatcttttcttcagggaaaaga
agtgacactagagagttacctggtgcagccctgctatgtctttctttcactcctaaagat
gtaaacaccttagggacatcaaagggattgcgggatgtacatgctggatatgagaaggca
ttgttggaaatagcttcatctcttcagctctcaagaaatatttttattgcccttatttca
ctgcaatcatggaagccctttgtgcggcgttgggtgagggcagatgtcttgtcctttgat
gctaaagtgccatctgtcttcttggataaaactgctaaagctgctagtgacattctgaag
agtatgataaaagcagctgaagaggctattcctagatctgctgaaaacattgcactagct
attggtgcactttgtgtggtcttgcctccatctgctcacactgttaaatcagatgcctca
aaatttctgttgaattggttggtccagcatgaacatgaacaccgcaaatggtctgctgcg
atttctcttggattgatctcaagttgcctacatgtaacagatcataagcaaaagtttgag
aatatcactggacttgttgaggttatgtgtagtagcaatagcacccttgtcagaggagcc
tgtgggcttgccttgggtttttcttgtcaagatcttcttaccagggttgatgctggtgat
aattctgacgtggacaaagaaacaggcaagatgacggaagcagacttgcttggtatgata
gttaaggcattatcactcctaataggtcagctcactcagttgccatctgatgttatggaa
agtctatctgcctactttccacctaacacatttggtatagatatgaatataactgctgaa
ctgtcacatgagaactctgatgactctctcgaagatatctggggtgttgctggacttgtt
cttggtttggcgagttctgttggtgctctgtacagagctggggcacatgatgctgttctc
aagataaaagacttgatcatttcatggattccacatatgactacatcagttcaagggtct
cggtcttttagtggggtttctgagatagttttatcagtaggatcctgtcttgcacttccc
attgtagtcgaattctgccaaagattagaactgatagatgataatgaagtacgccattta
gtgaatggctacagggagctcatttctgaattattgtctgtcaaaaaatctggcaccttc
tatcacagcttacttatggcatcttgtataggagcaggaagcctcatagcctgcatactg
aatggaggattgcattctcttgaagttgaacatgtaaaaggtctactggaattgtttaga
aaatgttattcgaatccttaccctcctttagtccatttgagtgggatgcttggagttgtt
aatgctatgggagcaggtgctgggatcctggttgacatgtatcctccaacctcaatgcag
acagcttatgaacacaaggaatctcgatatctcatgggccctctactttctagtcctact
tgcaagcagcatttgacgtcgttgatgcaggatatatttctggttgcacagaattctgat
gaccatcaattgcaacaatatgctgcatgggcagtttcgtttcttcgaaatcatctgttc
tctatcaatagcgatggaggtggttcaaaatcagtttctcaaagttttgcagatgacagt
ttagttctgaagctttcttcatggctaatgcatctcaattctgccgagacaggtagtgtt
gcgcacgttggcaccgtaataactgtgataaggtgcctttcacaagctcctcggttgctg
accttggattggggtacgatcatcagacgctgcatgagatatgaggctcaggttgctgag
ttgtttccaacagaatcatctcttgaaaaaggaaccctaagggaggaatgtgtgaagttc
tcattggctcatgccaataaatttgatcagctcctaagtttcctggatgagctgtccgac
ttgtccagattcagaactcttgagttgaagctgcaatcttgtcttctggatcatcttgta
gacctcattaaagtattctcaggttccaggcttgagaaattatttgatgatgtgcgtagc
tacttctcttctgttacttcatatcaatcacatggcactgatgagacaagcttattacgg
atttcatgctggaagggtttctatcagtgtttagatgaagcttctcttgactctcttgag
tacatatcccacatagaaaagggcatggaggtgctcttttccttgatgcctgcaatgcaa
ttgcctgccattggaggagtaggtcagttgcgtactgtagaggagtggtctgaggcagtt
agatgctttaggaaggctcggaaaagttggttgttggatttcctgcaggtttcccaggag
gacctgcaacaaagagatggtcagcttattgaagttctgaaaaaggttcaaaccaaagct
aagcttgttaggattggttccatcccattgactgagctgggaaggctaaaagcttggata
ttgaacacagaatcaaatggtatgtgggatgcgctcgttgacgttgtagcagctttgcaa
catgcagacggaagtgtcaaaagacagtggcttgttgatgcagttgaaattagctgtgta
tctagctatccttccatggcattgcaatttcttgggttgctatctggtagctggagcaaa
tacatgcctcttctgattctggaccaacttactgtgctgagcgatttaccagtcaccctt
tcctctctcctctcagactctagttggggaggagttgcggaatttgtcgttccttctctg
tttgcatcgacagaacgcatttacaactgggctatacatatcgcacggtgtgaggatatg
ccgcctgacatgcaacccattgataaaagtgagaattccatggctgtattcttattgaga
gtgatgcattgtacctgtgtgtctttgaaggattacctgcctctggagaagcagcttaag
cttgccaatatggtggttgcttga
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integrated database retrieval system