Prunus persica (peach): 18783191
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Entry
18783191 CDS
T03092
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18783191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18783191
03012 Translation factors [BR:
pper03012
]
18783191
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18783191
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
18783191
Translation factors [BR:
pper03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
18783191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
R3H
HA2_C
OB_NTP_bind
ATPase
Ank_2
HA2_N
AAA_19
AAA_22
Ank_5
nSTAND3
ResIII
AAA_23
Rad17
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
18783191
NCBI-ProteinID:
XP_007217089
UniProt:
M5X9U5
LinkDB
All DBs
Position
G3:complement(19532139..19541498)
Genome browser
AA seq
1282 aa
AA seq
DB search
MAKKNRGGQQQNSKVPESMRNRIAQLLSRFNSADDEVYTFEAGLSNHDRAEVHQQCRKMG
MKSKSKGSGKKRVVSVYKPKKKAAAVDGIPKLTHLTFSEGTKEVLRDLFMCYPPGDEVEG
REMYGTNSNENVKAKRKKDSMFCKPLMTKAEIAKKVQSLASRIKNSDKLRKITKEKSKLP
ITSYRDVITSAVESHQVILISGETGCGKTTQVPQFILDHMWGKGEACKIVCTQPRRISAA
SVAERISKERGENVGEDIGYKIRLESQGGRHSSIVLCTNGILLRLLVSRGAGRSKAGDSN
KETKQDVNDITHIIVDEIHERDHHSDFMLAIIRDMLSSHPHLHLILMSATVDAERFSHYF
GGCPIIRVPGFTYPVKTFYLEDVLSILKSVENNHLNTAVGLQNEDPDLTQELKLFLDEAI
NLAWSNDEFDPLLEFTSSERTRKVFNYQHSLTGLTPLMVFAGKGRTGDVCMLLSFGADCQ
LQANDGATALELAEREEQRETAEILKEHIENALSNSMKEQLLIDRYLQYFNPENVDFVLI
EQLLRKICSDSKDGAILVFLPGWDDIKKTQERLLTNPYFRNTSKVLIISLHSMVPSADQN
MVFKRPPPGCRKIVLSTNMAETAITIDDVVYVIDSGRMKEKNYDPYKNVSSLQSSWVSKA
SAKQRRGRAGRCQPGICYHLYSKVRAASLPDFQVPEIRRMPIEGLCLQVKLLDPDCNIED
FLIKTLDPPLSETIRNAVAVLQDIGALSLDEKLTVLGEKLGSLPVHPLTSKMLFFSILMN
CLDPALTLACATDFKDPFSLPMLPDDKKRAAAAKYELASLYGGHSDQLAVIAAFDIWKTA
KQRGQEKLFCSQYFVSSSTMHMLSRMRKQLQTELIRHGFIPEDVSRCSLNARNPGILRAV
LVAGLYPMVGRLLPVRKKMKRSVVETPNGVKVCLNNHSMNYKLGFKVTSDDRPLIMFDEI
TRGDSGVMNIRNCTVIGPLPLLLLSTEISVAPSNNDDDDGYIDEGSDMDDNEDESDEDAM
EIDGKSGGQHKEKIMSSPDNSVTVIVDRWLQFGSKALDVAQIYCLRERLSAAILFKVTHP
RKVLPPGLGASVYAIACALSYDGLSGISFPKESEESPTSVENETVTDDSVLPLQDCYLHK
SIMCDILRDDAHGSNDTNEMHCYFLRSCTPAVNGAAKSSDPLSHSILNAHQKPLSQGTSI
PAANGAVRFYVIGNGAAKLSDPSSHSVQPPLDSAPITAHQKPPSQGPDLVGNGASTDASD
GPRGESPVKRKKRRNKGREQSS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaacagaggcggccaacaacaaaacagtaaagttccagaaagcatgagg
aaccgaatagctcaattactctcccgcttcaattccgctgatgacgaagtttacacattt
gaggccggtctctcgaaccatgaccgtgctgaagtgcatcaacaatgcaggaaaatgggt
atgaaatccaagagtaaagggagtgggaaaaaacgtgttgtgtctgtttataaacctaaa
aagaaggctgcagccgttgatggtattccaaagctcactcatctgacattttccgaaggc
acaaaagaagtattgagggacttgttcatgtgttacccacccggtgatgaagtggagggc
agagaaatgtatgggacaaatagtaatgagaatgtgaaagccaagcggaagaaagatagt
atgttttgcaagcctttgatgaccaaggcagaaattgcaaagaaagtgcaatcacttgct
tctagaataaagaattccgataaattgagaaagatcaccaaagagaagtctaagcttcca
attacatcctacagggatgtcattacatcagcagttgaatctcatcaggtaattcttata
tctggtgagactgggtgcggaaagaccacacaggtcccacagtttattttggaccatatg
tggggtaagggggaggcatgtaaaatagtgtgcactcaacctcgacgtatctcagctgca
tcagttgccgagagaatctctaaggaaagaggagaaaatgttggagaggatattggatac
aagatacggttggaaagtcaaggtggcaggcactcatcaattgtgctctgcacaaatggg
attctgttgaggttgttagtgtccagaggcgctggtagatcaaaagcaggtgactcaaac
aaagaaaccaagcaagatgtcaatgacataactcacattattgtggatgaaattcatgaa
agggatcaccactcagattttatgctggcaattataagagacatgctttcttcacaccct
catctacatctgatactgatgagtgcaactgttgatgctgaacggttttcacattatttt
ggtggatgcccaattatccgtgtccctgggttcacttatcctgtcaaaactttctatttg
gaggatgtactttctatcctgaaatccgtagaaaataatcaccttaatactgcagtaggt
ttacagaatgaagatcctgacttaacacaggaattgaagctttttctagatgaagctatt
aatctggcttggtctaatgatgagtttgatccccttctagagtttacttcttctgaaaga
actcgcaaagtctttaattaccagcattctttaactggacttacgccgttaatggtgttt
gctggaaagggtagaacaggagatgtttgcatgctgctatcttttggtgcggactgccaa
ttacaggccaatgatggagcaactgcattggagttggctgaacgggaagagcagcgagaa
actgctgagatattgaaagagcatattgaaaatgctctttctaactctatgaaagaacaa
ctgttaattgatagatatctccaatattttaatcctgaaaatgttgattttgttcttatt
gagcaattattaaggaaaatttgtagtgattcaaaagatggagccatccttgtgttcctt
ccagggtgggatgatataaaaaaaacccaggagagattactcacgaacccgtatttcaga
aatacttctaaggttttgataatatctctacattcgatggttccatctgctgaccaaaac
atggtcttcaaacgcccccctcctggttgccgtaaaattgttctttcaactaatatggct
gaaactgccatcaccattgatgatgtcgtttatgttattgatagtggccggatgaaagaa
aaaaattatgatccttacaaaaatgtatcaagtcttcaatcttcctgggtgtcaaaagcg
agtgccaagcaacgacggggccgtgctggtcgttgtcagcctggaatctgttatcatctt
tattctaaagttcgagcagcttcattgccagattttcaggtgcctgagattaggagaatg
ccaattgaagggctttgcctgcaggtgaagttacttgatccagattgcaatatagaagat
ttcttgattaagacattggatcctccactttccgagaccatacgcaatgcagttgctgtt
cttcaagatattggggctttgtcacttgatgagaaacttacagtacttggggagaagcta
ggttctctacctgttcatccattgacgagcaagatgcttttcttttctatactgatgaac
tgtcttgacccagctttgactctggcatgtgctactgacttcaaggatccattttccctg
cctatgttacctgatgataagaagagagccgctgctgctaaatatgaacttgcttcattg
tatggtgggcatagtgatcagctagcagtcatagcagcatttgacatatggaagactgct
aaacaacgaggtcaagagaaactgttctgttctcaatactttgtgtcttcaagtacgatg
catatgctatctcgtatgcgcaagcagctccagacagagctaattcggcatggttttatc
cctgaggatgtatcaagatgtagcttgaatgcacgtaacccaggaatactccgtgctgtt
ctcgtggccggtttatatccaatggtggggagattgcttcctgttcgcaagaagatgaaa
cgatctgttgtagaaactcctaatggggttaaagtttgtttaaacaaccactctatgaat
tataagttaggtttcaaggttaccagtgatgatcgtccattgattatgtttgatgagata
acccgtggggattcgggtgtgatgaacatacggaactgtactgttatcgggccacttccg
ttactattgctttcgacagaaatttctgttgctccatcaaacaatgatgatgatgatggt
tacattgatgaggggagtgatatggatgacaatgaggatgaaagtgatgaagatgcaatg
gagatagatggtaagtcaggtggacaacacaaggagaaaattatgtcatctcctgataat
tcagtcacagttatagtggatcggtggcttcaatttgggtcaaaagctctggacgttgct
cagatctactgcttgagagaacgtttatctgcagcaatcttattcaaagttacacatcca
aggaaagttttgcctcctggtcttggggcctcagtttatgctatagcctgtgctctatcg
tatgatggtctatctgggatctcatttccaaaggaatccgaggagtctccgacttcggtg
gaaaatgaaactgtgactgacgactctgttttgccccttcaagattgctacttacacaaa
tcgattatgtgcgatattttaagggatgatgcacatggaagcaatgacacaaatgaaatg
cactgttacttcctcagatcatgtactcctgccgtcaatggagcagccaagtcgagtgac
ccgttaagtcacagtatcctgaacgcacaccagaagcctctatcacaaggcacgagtata
cctgctgctaatggagcagtacggttttatgtgattggaaatggggcagcaaagttgagt
gacccatcaagtcacagtgttcaaccaccgcttgattctgctcccatcaccgctcaccag
aagcctccatcacaaggtccagatttagttggcaacggtgcaagcactgatgcatcagat
ggtccaaggggagagtcgccagtgaagaggaagaagcgtaggaataagggtagagaacaa
tcatcttga
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integrated database retrieval system
