Prunus persica (peach): 18783820
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Entry
18783820 CDS
T03092
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18783820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18783820
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18783820
mRNA degradation factors
5'-3' decay
Decapping complex
18783820
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
18783820
NCBI-ProteinID:
XP_020416650
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Position
G3:20151272..20157245
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AA seq
808 aa
AA seq
DB search
MERSNGADFRDFLENSSGSSDNKLFDASQYEFFGQKSVEEVELGGLEDEEDRKPLFGPVD
NEYHLFEKDEGLGLGSLSDVDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSAAD
WAQDGDFSNWLDQHMFDTESSQEGKRWSSQPQPSSARFSESKQPKPLYRTSSYPEQQPVQ
HHFTSEPILMPKSTFTSFPPPGNRSQQGSPHHQLNISTLAGGSQLPFSAPNLSPLSNSNL
LMAGLPHGLHYGGNMPQFTNPGLPFNSRAQNHWATHSGVLHGDHSSIINNILQQQHPHQN
GLLSPQLLSAQQQLQQQRLHHSVQPSLAHFAAMQSQLYSTHPSPSHKGMHGLSDTRDHRP
KHRGKQRYSQGSDTGSQKSESGWIQFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQ
ASLSKKSAGSRSKHPFCPSHLREFPSRGRNSSDQHTHSSVDALGRIPLSSIRRPRPLLEV
DPPSGSGDGEQASEKPLEQEPMLAARIAVEDGLCLLLDVDDIDRLIQHGQPQDGGVQLRR
RRQILLEGLASSLQLVDPLGKGTQAVGLAPKDDLVFLRLVSLPKGRKFLSRFIQLLFPGS
ELARIVCMTIFRHLRFLFGGLPSDSGAAETTTNLAKTVSTCINGMDLRALSACLVAVVCS
SEQPPLRPLGSPSGDGATIILKSVLERATEILSDPLAAGNCSRPNRALWQASFDEFFGLL
TKYCLSKYETIVQTIFTQPQQSTEVIGSEATKAIHREMPVELLRASLPHTDERQRKLLSD
FAQRSMPISGLNAHGGGGGQMNSESVRG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctaatggcgcagattttagggactttctcgagaattcctcaggttcctca
gataataaactctttgatgcctcacaatacgaattttttggtcaaaaatcggtggaagaa
gttgagttggggggtttggaagatgaggaagacagaaaacctttatttggccctgttgat
aatgagtaccatttatttgagaaggatgagggtctaggtttgggatctttatctgacgtg
gatgatctggcaagtacttttgcaaagttaaacaaagttgtaacgggaccaagacatcca
ggagttataggagacagaggttcaggatccttttcacgggaaagttcatctgctgctgat
tgggcccaagatggagatttcagtaactggttagatcagcatatgtttgatacagaaagt
tcccaggaaggtaagaggtggtcgtcacagccccagccttcttctgcccgattttccgaa
tcaaaacaaccaaaacctttgtacagaacatcctcataccccgagcagcagccagtccag
catcacttcaccagtgaaccaattttaatgcccaaatcaacgttcacatcattcccacct
cctggaaacaggtcccagcagggttcaccacaccaccagctgaatatttctactcttgct
ggtggttcccagttgcccttttctgccccaaacctttctcctttatctaactctaatctt
cttatggctggtttacctcacgggttgcattatggagggaacatgcctcagtttaccaac
cctggccttcccttcaatagcagggcacaaaatcattgggccacgcattctggagttttg
catggggatcattccagcatcataaacaatatactgcagcaacagcaccctcatcaaaat
ggacttctgtccccacaattactgtcagctcagcagcagttacaacagcagagattgcac
cattcggttcagccatctttggcccattttgcagcaatgcagtctcagctttatagtacc
catccttctccttcacataagggaatgcatgggttgtctgacacaagagatcatagacct
aaacatagaggaaaacagcgttactctcaaggctctgatactggtagtcagaaaagtgag
agtgggtggatccagttcaggtctaagcacatgacatctgaagagatagagagtattctt
aagatgcagcatgctgcgacacatagcaacgatccctatatcgatgattattaccatcag
gcaagtctttcaaaaaaatcagctgggtcgcggtcaaaacaccctttctgcccatctcat
ctgagagagttcccttcccgaggtcgtaatagtagtgatcagcatactcatagttctgtt
gatgcccttggaagaattcccctatcttccatacgtaggcctcgccccctccttgaagtt
gaccctccctctggttctggtgatggcgaacaggcctctgagaagcctttggagcaggaa
ccaatgcttgctgctagaattgccgttgaggatggcctttgtctcctccttgatgttgat
gatattgatcgacttatacaacatggtcagccccaagatggtggggttcaactcaggcga
aggcggcaaatcttgttagaagggttggcatcatcacttcagcttgtcgatccacttggt
aaaggcacccaagcagttgggctggctccaaaggatgaccttgtgttcctacggttagtg
tctcttcctaagggccgaaaattcctttctaggtttattcagcttctcttccctggtagt
gagcttgcccgtattgtctgtatgacaatattccggcatttaaggtttttgtttggtggc
ctaccatctgattctggagccgctgagacaactactaatcttgcaaagacagtttctacg
tgcattaatggtatggatcttcgtgcactaagtgcttgtctcgttgcagtagtttgttcg
tcagagcagcccccactccgaccccttggaagcccttctggagatggggccactattatt
ctaaaatctgttcttgaaagggcaactgaaatcttaagtgaccctcttgctgctgggaac
tgcagcaggcctaaccgtgccctttggcaggcatcctttgatgaattctttggtcttctt
accaagtattgcttgagtaaatatgaaactatagtacaaacaatatttacacagcctcag
caaagcacagaagttattggttcagaggctaccaaggcaatccatcgtgaaatgccagtg
gagcttctacgtgctagtcttcctcacactgacgagcgtcaacggaagcttttgtcagat
tttgctcaaaggtcaatgcctatttctggtcttaatgcccacggtgggggtggaggtcaa
atgaactctgaatcagtgaggggatag
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