Prunus persica (peach): 18784353
Help
Entry
18784353 CDS
T03092
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18784353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18784353
Enzymes [BR:
pper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
18784353
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
18784353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
CbiA
AAA_22
AAA_24
ABC_tran
AAA_29
ATP_bind_1
FtsK_SpoIIIE
Glyco_transf_N
MMR_HSR1
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
18784353
NCBI-ProteinID:
XP_007215421
UniProt:
M5XC03
LinkDB
All DBs
Position
G3:complement(25250509..25253738)
Genome browser
AA seq
429 aa
AA seq
DB search
MAQGGGAKQVKLERESELRIEVGNDAPLKLRLLNGTAEIFGTELPPEIWLTFPPRLKFAV
FTWYGATIEMDGSTETDYTADETPNISYVNVHAVLEERRNRAKASPPEDSNSSQPQGPRV
IVVGPTDSGKSTLSKMLLSWAAKQGWKPTFVDLDIGQGAITIPGCIAATPIEMPIDPVEG
IPLEIPLVYFYGHTTPSNNVDLYKVLVKELAQVIERQFSANAESRAAGMVINTMGWIEGQ
GYELLLHAIDTFDANVVLVLGQEKLCSMLRDVLKNKPGVDVVKLQRSGGVVSRNAKFRQK
SRSHRIREYFYGLANDLSPHSNIANFSDLSVFRIGGGPQAPRSALPIGAEPAADPTRLVP
VNINRDLLQTVLAVSFAKDPDQIISSNVAGFIYITDIDLHRKTITYLAPSAGDLPSKYLI
AGNLPWLET
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaggaggtggagcaaagcaggtgaaattggaacgagagagcgaacttagaatc
gaagtgggcaacgacgcgcctctcaagcttcggctgctcaatggcacagccgagatcttt
ggcaccgagctcccccctgaaatctggctcaccttcccacccaggctcaagtttgctgtt
tttacttggtatggagcaacaattgagatggacggcagtacggaaaccgattacaccgct
gatgagaccccaaacatcagttatgtaaatgtgcatgccgtactggaagaacggagaaac
cgtgctaaagcctcgccgcctgaagactccaattcttctcagcctcagggcccgagggtg
attgttgtgggacctacagattctgggaaaagtaccttgtccaaaatgcttcttagttgg
gcagctaagcagggatggaagcctacttttgtcgacttggatattggacaaggagctata
acaattcccggatgcattgccgctactcctattgaaatgcctattgatccggttgaagga
attcctcttgaaattccccttgtttatttctatgggcacacaactcctagtaacaatgta
gatttatacaaagtacttgtgaaggagcttgctcaagtgatagagagacaattttctgct
aatgctgaatctcgagctgctggaatggtgatcaacactatgggatggatagaaggtcaa
ggctatgagttgcttcttcatgcaattgatacattcgatgccaatgttgtcttagttttg
ggacaggaaaagctttgcagcatgctcagagatgtactaaagaacaagcccggtgtggac
gttgttaaacttcaaagatcagggggtgttgtatccaggaatgcgaaattccgtcaaaaa
tccaggagtcataggataagggaatatttttatggccttgcaaatgatctgagcccgcat
tctaatatagcaaatttcagtgatttatctgtctttcgaattggtggtgggccacaggcc
ccacgttcagctttgccaattggtgcagagcctgccgcagatcctacaagattggtgcct
gtgaatattaacagggatttgctccagacggttcttgctgtttcattcgccaaggatcct
gatcaaattatttctagtaatgttgctgggtttatttatatcacagacattgatcttcac
aggaagacaattacatatcttgcaccatctgcgggcgatcttccaagcaaatatttgatt
gcaggaaacttgccatggcttgaaacatga
DBGET
integrated database retrieval system
