Prunus persica (peach): 18784373
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Entry
18784373 CDS
T03092
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18784373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18784373
03009 Ribosome biogenesis [BR:
pper03009
]
18784373
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18784373
Spliceosome [BR:
pper03041
]
Complex A
U1 snRNP components
U1 related factors
18784373
Complex B
18784373
Ribosome biogenesis [BR:
pper03009
]
Eukaryotic type
Pre-60S particles
Helicases
18784373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18784373
NCBI-ProteinID:
XP_007215261
UniProt:
M5XBL9
LinkDB
All DBs
Position
G3:3575101..3580538
Genome browser
AA seq
504 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSSKKDCDGAESPRKFDLDGLTPFEK
NFYVESPEVERMSEKEVEDYRQRREITIEGRDVPKPIKSFRDTGFPEYVLEEVTKAGFVE
PTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPT
RELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQRGVEIVIATPGRLIDMIESHH
TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYN
PYKVIIGSPDLKANHAIRQIVDIITENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQIT
RQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDF
PGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIALLEEAGQKVSPELAAMGRGA
PPPPSGHGGFRDRGRGYGGGRPWN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctatgacagccgctccggcgaccccacttcgtaccgtgaccggaaaagtgat
tcggggtttggtgtgaccggctacggtggctcagcacggtcttcgtcaagcaagaaggat
tgtgatggtgctgagtcaccgaggaaatttgatttggatggattgacacctttcgagaag
aatttctatgttgagtcacctgaagtggaaagaatgtcggagaaggaggttgaggactat
aggcaacggagggaaattactattgaaggccgtgatgttccaaagccgatcaagagtttc
cgtgacactgggtttccagaatacgttttggaagaagttacaaaggctggatttgttgaa
cctacaccaattcaagctcaaggatggccaatggctttgaagggtcgtgatctcattggt
attgctgaaacaggatctgggaagacgctagcctacctgttgcctgcaattgtccatgtc
aatgcccagccaattctatctcctggagatggcccaatagtattagttttagctccaacc
cgtgagctcgctgttcaaatccaacaagaggctactaaatttggctcgtcttcaaaaatt
aaaagcacatgcatatatggcggggttccaaagggacctcaagttcgtgatctgcagagg
ggagttgagattgtaattgctacacctgggaggttgattgatatgatagagtcgcatcat
accaacttgcgaagggtcacataccttgtgttggatgaggccgatcggatgctagacatg
gggtttgacccacagatacggaaaattgtttctcagattcgcccagaccgtcaaacatta
tactggagtgctacctggccaaaggaggttgaacaactggcgaggcagttcctttacaac
ccatacaaagtgataataggttctccagatttgaaagctaaccatgcgatccgccaaatt
gttgacatcattacagaaaatcagaaatataacaaactggtaaagttgcttgaggacatc
atggatggcagcagaatactgatattcatggatactaagaaaggatgtgatcagatcact
cggcagctccgcatggatggttggcctgctctctcaattcatggagacaaaagtcaagca
gaaagggattgggtcctctctgagtttaaagccggcaagagccccataatgaccgcaaca
gatgttgctgctcgtggtctagatgtgaaggatgtgaaatttgttattaactatgatttt
cctggatcccttgaggattatgttcaccgcattggccgaactggaagagctggggcaaaa
ggaacagcatacacgtttttcacagctgctaatgctaggttcgcaaaggaacttattgcc
ttgctcgaggaagctggacagaaggtcagtcctgaattggcagcaatgggccgcggtgca
cctcctcccccttcaggtcatggcggttttcgagatcgcggtcggggttacggtggaggt
cgtccttggaactaa
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