Prunus persica (peach): 18784994
Help
Entry
18784994 CDS
T03092
Name
(RefSeq) endoribonuclease Dicer homolog 1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18784994
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18784994
microRNA pathway
RISC loading complex
18784994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
dsrm
PAZ
DND1_DSRM
Helicase_C
DEAD
ResIII
Dicer_dsRBD
Dicer_PBD
SNF2-rel_dom
SLFN-g3_helicase
SWI2_SNF2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18784994
NCBI-ProteinID:
XP_007220573
UniProt:
M5X6U0
LinkDB
All DBs
Position
G2:complement(23762180..23772418)
Genome browser
AA seq
1971 aa
AA seq
DB search
MEEEARVSGNTGTGNGSEAIRDSSYWLDACEDISCDVIGDLVDFCDAPVGGPPVLANGNG
CSQEEDGLVSDFFGGIDHILDSIKSGAGLPGVIDPNSNANANGVIGNAAVEGCFQMEASG
VLKTVEVNGSVGLNGETGGRNLDIANGDTKGDRNGYHKYEKGRGNGVVRRREMNGEERCP
KRVALDDGRNEKYYASGRMQHHMRENSYSRKRPRDSEDIDWRDRDRDRDRDRTRRRENYG
SNNRREGGRDREAKGYWERDKLGTNDIVFRLGPYEPDHNKEGKITDVKNQECNGKAEKKP
EEVKEKIPEERARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIQSICNDMQRQNKKM
LSVFLVPKVPLVYQQAEAIRERTGYEVGHYCGEMGQDFWDTRRWQREFDTKQVLVMTAQI
LLNILRHSIIKMESINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVN
LKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPTPSEIVVQYDKAASLWSLHEQ
LKQMEGEVEEAAKSSSRKSKWQFMGARDAGAKEELRQVYGVSERTESDGAVNLIQKLRAI
NYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCHLSEGAVSD
KEAKVADSGSAVSCDENDPDEMEEGELPDSHVVSGGEHVDVVIGAAVADGKVTPKVQSLI
KVLLKYQHTEDFRAIIFVERVVSALVLPKVFAELPSLGFIECASLIGHNNSQEMRSCQMQ
DTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL
MVERGNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDTTPGTVYQVESTGA
VVSLNSAVGLIHFYCSQLPSDRYSILRPEFVMVRHEKPGGPTEYSCKLQLPCNAPFETLE
GPVCSSMHLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEKEQVDQTDEGDPLPGTARH
REFYPEGVANILQGEWILSRRDLGSDSKLVHVYMYGVKCVDVGSSKDPFLTQVSDFAVLV
GKELDAEVLSMYMDLFIARTMTTKVSLVFKGSIDITESQLASLKSFHVRLMSIVLDVDVE
PSTTPWDPAKAYLFVPVVGDKFGDPMKEIDWDLVENINGADAWNNPLQRARPDVYLGTNE
RTLGGDRREYGFGKLRNGMAFGQKSHPTYGIRGAVARFDVVKASGLVPDRDALEMRKHMD
LPKGKLIMADTCSSVKDLVGRIVTAAHSGKRFYVDSICYDMTAENSFPRKEGYLGPLEYS
SYADYYKQKYGVELVYKQQPLIRGRGVSYCKNLLSPRFEHMEEHDGESEETLDKTYYVFL
PPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVELRDIINYPIPASKILEALTAASCQ
ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALKKGLQS
YIQADRFSPSRWAAPGVLPVFDEYTKDEESSLFDHEDGPVGEINRSGDAYEDDELEDGEL
ESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIEVEFNPDGVESTPKSS
TVPENVLRSVNFDALEGALNSKFKDRGLLVEAISHASRPSAGVSCYQRLEFVGDAVLDHL
ITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHLHLRHGSSALEKQIHDFVKE
VQNELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTP
ETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGIQMGIAQNPQKKMAQKLAA
RNALAALKDKETAEAKEKEEENGKKKKNGSQTFTRQTLNDICLRKNWPMPFYRCVNEGGP
AHAKRFTFAVRVNTTDRGQTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggctagggtttcagggaacactgggactgggaatggctcggaggccatt
cgagattcctcctactggctcgatgcttgtgaggacatatcatgtgatgtaattggtgat
ttggttgatttctgcgacgctccagttggtggtcctccggtgttggccaacggcaatggc
tgcagccaggaggaggatggtctggtgagcgattttttcgggggaattgatcacattctt
gacagtatcaagagcggagctggcctccccggcgtgattgatccgaattcgaatgccaat
gccaatggtgttattggcaatgctgctgtggagggttgctttcagatggaggcatctggg
gttttgaagacggtggaagttaatggctcggttgggctcaatggtgaaaccggtgggagg
aatttggatattgctaatggagacactaagggtgatcgaaatggttatcataagtatgag
aagggtaggggcaatggggttgtgaggaggagagagatgaatggtgaagagagatgtccc
aagagggttgctttggatgatggcaggaatgagaagtattatgcttcaggcagaatgcaa
catcacatgagggagaatagttatagtaggaagaggcctcgtgattcagaggatattgat
tggagggatagagatagagatagggatagagatcggactaggagaagagagaattatggt
agtaataataggagggaaggtggtagagatagggaggcaaagggttattgggagagggat
aagttgggaacgaatgatattgtttttcgattagggccttacgaacctgatcataacaaa
gaagggaagattactgatgtcaaaaaccaggaatgcaatgggaaggctgagaagaaaccc
gaagaggttaaagaaaaaattcctgaggagagagccaggcagtatcaattggatgttctt
gaacaggcgaagaagagaaatacaatagcttttcttgaaacaggggcgggaaagacgctc
attgctgttctcctcatccaaagtatttgcaatgatatgcaaaggcagaacaagaagatg
ctctctgtatttttagttcctaaagttccccttgtttatcagcaagcagaagctattcgt
gagcgaactggttacgaagtgggccattattgtggtgagatgggtcaagatttctgggac
acccgaagatggcagcgtgagttcgacacaaaacaggttctggtaatgacagcccaaatt
ctgttgaacattctgaggcacagcattataaaaatggaatcaatcaatctcttgattctg
gatgagtgtcatcacgctgtgaagaaacatccatattctttagtgatgtctgagttctat
cacacaaccccaaaggagaagagaccggctgtatttggaatgactgcttctcctgtcaac
ttaaagggtgtttccagccaagtagattgcgcaataaagattcgtaatctcgaaagtaaa
ctagattccatcgtttgtaccataaaagaccgtaaggagcttgaaaagcatgttccaacg
ccctctgaaattgtggtgcagtatgacaaagcagccagcttatggtcccttcatgagcag
ctaaaacaaatggaaggggaagttgaagaagctgcgaagtctagctctagaaaaagtaaa
tggcagtttatgggagctagagatgctggggctaaggaagagctgcgccaagtttatggt
gtttctgaaagaacagaaagtgatggggctgtgaacttaattcaaaagttgagggctatc
aattatgcactcggtgaactgggtcaatggtgtgcttacaaggttgcacaatctttcttg
acagctctgcaaaatgatgagagggcaaactaccagcttgatgtcaagtttcaggaatcc
tacctgagtaaagttgtatctctcttacaatgtcatctatcggagggagctgtttctgac
aaggaagcaaaagtggcagattcgggaagtgccgtttcttgcgatgaaaatgaccctgat
gaaatggaagaaggagagctacctgatagccatgttgtctctggtggggagcatgtagat
gtggtaataggagctgctgtagctgatgggaaggtgactccaaaagtgcagtcactgatt
aaagtacttctcaagtatcagcatacagaagattttcgtgcaatcatctttgtggagcga
gttgtgtctgctttagtccttcctaaggtatttgcagaacttccttctttaggttttatt
gagtgtgcaagcctgatcgggcacaacaatagtcaggaaatgcgaagttgccaaatgcag
gatactattgccaaattccgggatggtcgtgtcacattattagttgccactagtgttgct
gaggaaggacttgatattcggcagtgcaatgttgttattcgctttgaccttgcaaaaact
gttttggcttacattcagtctaggggtcgtgctagaaaacctgggtcagattacatcttg
atggtggagaggggaaatctgtcgcatgaagcattcttaaggaatgccaggaatagcgag
gagactttacggaaagaagcaatagagagaactgacctgagtcatctgaaggatacttct
aggttaatttcagtggatacaacaccaggtacagtgtaccaggtcgagtcaactggtgct
gttgtaagcttaaattctgctgttgggctcatccatttctactgctctcagcttcccagt
gacaggtattcaattcttcgtcccgagtttgtcatggtgaggcatgagaagccaggaggt
cccacagaatattcatgcaaacttcaactcccttgtaatgcaccatttgagacacttgag
ggtcccgtgtgcagttcaatgcaccttgcacaacaggccgtttgtttggctgcttgcaag
aaactccatgaaatgggagcatttaccgacatgctcttgccagacaagggaagtggggaa
gaaaaagaacaggttgaccagactgatgaaggagatccacttcctgggactgcgaggcac
agagagttctatcctgaaggcgtagctaatattctacagggagaatggatcttatccaga
agagatttgggcagtgactccaaattggttcatgtttacatgtatggtgtgaaatgtgta
gacgttggctcttcaaaagatccattcttgactcaagtttcggattttgcagttctagta
ggcaaagaactggatgcagaggtgttatcgatgtatatggatctatttatcgctcgaacc
atgactacaaaggtgtcccttgtcttcaagggttcaatagatattactgaaagtcagttg
gcatcccttaaaagttttcatgtgagattgatgagtattgtactggatgtggatgttgaa
ccttccaccactccttgggatcctgcaaaggcttatttgtttgttcctgtggtcggtgat
aagtttggagatcctatgaaagaaattgattgggatctggttgaaaatataaatggtgca
gatgcttggaacaatccccttcaaagagctcgaccagatgtttaccttggcacaaatgag
cgtacactaggcggagacagaagggagtatggttttgggaaattgcgtaatggcatggct
tttgggcaaaaatcccatccaacctatggtatcagaggtgctgtggcacggtttgatgtt
gttaaagcttctggattggtaccagatcgggatgcccttgaaatgagaaagcatatggat
ttgcccaaaggcaagttaattatggcagatacttgtagcagtgtcaaagacttggtaggg
aggattgtgacagctgctcactcaggaaagaggttttatgtggattcaatatgctatgat
atgactgcagaaaactctttcccaaggaaagaaggctaccttggccctctggagtacagc
tcatacgctgattattacaagcaaaagtatggagttgagttggtttataaacaacaacct
ctaataagaggacgcggtgtctcatattgtaagaatctcctgtctcctcgatttgaacac
atggaagaacacgatggtgaatcagaagagactcttgacaaaacgtactatgttttcctc
cctcctgagctgtgtttagtacacccactgcccggatcacttgtccgtggagcccagaga
ttgccctcgataatgagaagggttgaaagcatgctgcttgcagttgaacttagagatata
ataaattatcctatccctgcttcaaagatcttggaagccttgacagctgcttcatgccag
gagacattttgctatgaaagagcagagcttcttggtgatgcttacctgaaatgggttgtt
agtcgatttctctttcttaaataccctcagaaacatgagggtcagcttactaggatgagg
caacaaatggtgagtaacatggttttatatcagtatgcattgaagaaaggacttcaatca
tatatccaagcagatcgcttttctccatctcggtgggctgctcctggggtcttgcctgtc
tttgatgagtatacgaaggatgaagaatcatccttgtttgatcacgaggatgggcctgta
ggtgaaatcaatcgctctggtgatgcatatgaggatgatgagctagaggatggtgagctt
gagagcgactcaagttcttatagagtcctctctagcaagacacttgcagatgttgtcgaa
gcacttattggagtttattatgtagaaggcgggaaaaacgctgctaaccatctcatgaaa
tggattggaattgaggtagagtttaatcctgatggggtagagagcacaccaaagtcatct
accgttccagagaatgtacttaggagtgtcaactttgatgccttagagggtgctttgaat
agcaaatttaaagataggggccttttggtagaagccattagtcatgcgtcccgaccgtct
gctggagtgtcctgctatcagcgattggagtttgttggcgatgccgtcttagatcatctc
attacaaggcatttgttcttcacatacacaaatctgcctccaggcaggttgactgacctg
cgagctgctgctgttaataatgaaaattttgcacgtgttgctgtaaaacataaactccat
ctacaccttcggcatggatcaagtgcccttgaaaaacagattcatgactttgtgaaggaa
gtgcaaaatgaattatcaaagccagggttcaactcctttggtttgggagattgcaaagct
ccaaaggttcttggggacatttttgaatctattgcgggtgccatttttcttgacagcgga
cgtgatactgcagttgtttggaaggtctttcaacctctattgcacccaatggttactcca
gagacactcccaatgcatcctgtgcgagagctgcaagaaagatgccagcaacaggctgaa
ggcttggaatacaaagccactcgaagtggaaatttggctactgtcgaagttttcattgat
ggcatccagatgggaattgctcagaatccgcaaaagaagatggcacagaaactggctgct
aggaatgcacttgctgctttgaaagataaggaaacagctgaagcaaaagagaaggaggag
gagaatgggaagaagaagaagaatggtagccaaacatttacccgacaaaccttaaatgac
atctgcttgcgaaaaaattggcccatgccattctaccggtgcgtgaatgaaggcggccct
gcacatgcaaagaggttcacatttgctgtacgtgtgaataccaccgacaggggacagaca
gacgaatgcgtgggagagcctatgcccagtgttaagaaggccaaggactcggcagcagtt
cttctcttggaacttttaaataagttatactcgtga
DBGET
integrated database retrieval system
