Prunus persica (peach): 18785439
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Entry
18785439 CDS
T03092
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18785439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18785439
03012 Translation factors [BR:
pper03012
]
18785439
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18785439
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
18785439
Translation factors [BR:
pper03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
18785439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
T2SSE
AAA_16
Myosin_head
AAA_23
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18785439
NCBI-ProteinID:
XP_007218910
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All DBs
Position
G2:complement(8957388..8971010)
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AA seq
1152 aa
AA seq
DB search
MRSSRAAVGLLLKAVSNKNNACYPFYRTHTRYLALLLLHSSSSSSISNGGFLVSKRGFCG
YAAEQFSDDEYECDFEGQKASSSVANIDEWKWKMSLLLRSEKDQEIVSRDKRDRRDYEQI
SNLAKRMGLYCEIYGKVVVASKIPLPNYRPDLDDKRPQREVVIPLGLQRRVEGLLQEHLD
RVRLNSGKFTDNRGDSEHLDQLENAIPDENADSLLDGSVMEKVLQRRSLRMRNMQRAWQE
SPEGKKMLDFRKSLPAFKENERLLQAIAQNQVIVISGETGCGKTTQLPQYILESEIESGR
GAFCSIICTQPRRISAMAVAERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILL
RRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSN
YFGGAPTIHIPGFTYPVKAHFLEDVLEMTGYKLTSFNQIDDYGQDKMWKTQKQLVPRKRK
NQITALVEDALNKSSFESYSPRARDSLSCWTPDCIGFNLIEAVLCHICRKERPGAVLVFM
TGWEDISCLRDQLKAHPLLGDPNRVLLITCHGSMATSEQKLIFGRPPPNVRKVVLATNMA
EASITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECFHL
YPRCVYHAFAEYQLPELLRTPLNSLCLQIKSLQVPSIGEFLSAALQPPEPLAVQNAIGFL
TSIGALDDNENLTSLGKYLSILPVDPKLGKMLIMGAVFHCFDPVLTIVSGLSVRDPFLLP
QDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHS
LRKQFNYILRDAGLVDADASINNKLSHNQSLVRAIICSGLFPGIASVVHRETSMSFKTMD
DGQVLLYANSVNARYQTIPYPWLVFGEKVKVNTVFIRDSTGVSDSILILFGGSLNHGVQA
GHLRMLEGYIDFFMDPSLVDCYLKLKEELNELIQKKLQDPSLDIHKEGKYLMLAVQELVS
GDQCEGRFVFGRDSKRPKESGDNSRFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKSNE
FRALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDNSRDEENNSPPDVTDNMLKL
LGKRRRSKRQSG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagctcgagagcagcagtgggtcttcttctcaaggcagtctccaacaagaataac
gcttgttatccattttaccgcacacacactcgatacctcgccttactacttctgcactct
tcttcttcttcctcaatctccaatggcggattccttgtttccaagcgtgggttttgcggc
tacgctgccgagcagttctctgacgacgagtacgagtgcgatttcgagggccaaaaggca
tcatcttcggtggcgaacattgacgagtggaaatggaaaatgagcttgctgttgcgcagc
gaaaaggaccaagagattgtatccagagataagagggataggagagactatgagcagata
tcgaacctcgccaaaaggatgggactttattgtgaaatatatgggaaagtggtggttgcc
agcaagattcctcttccaaactacaggccagatttggatgataagcggccacaaagggag
gtggttatccctcttggtttgcaaaggagggtagagggtttgctgcaggaacaccttgat
cgagtccggttaaactctggaaagttcaccgacaatagaggtgactctgagcaccttgat
cagcttgaaaatgcaattcctgatgagaatgccgattctcttctagatgggtctgtcatg
gagaaggttcttcagaggaggagtttgcggatgcgtaatatgcaaagagcttggcaggaa
tcacctgaaggcaagaagatgctagacttccgcaaatcactaccggctttcaaggagaat
gaaaggttgctgcaagcaattgcacaaaatcaggtaatagtgatttctggagagactgga
tgtggtaagaccactcaacttcctcaatatatactagagtcagaaatagaatctggccgt
ggagcattctgtagcatcatttgtacacagcctcgaagaatatctgctatggctgttgca
gaaagagtgtcagcagagaggggagagcctcttggtgagacagttggttataaagttcga
ttggagggaatgaagggaaaaaatacccatctgcttttctgtaccagtggtattttactt
cgccgtctgttgagtgatcgcaacctgaatggtataacccatgttttcgttgatgagatt
catgagcgaggcatgaatgaagacttcttattgattgtgttgaaggatctgcttccacgc
cgtcgggatttaagattggttttaatgagtgccactctgaatgctgagctattttcaaat
tattttggaggagcaccaacaattcacattccgggctttacatatccagtcaaagcacac
tttttagaagatgtacttgaaatgactgggtataagttgacctctttcaaccaaattgat
gattatggccaagacaaaatgtggaaaacacagaagcagttagtgcctcgaaaaaggaaa
aaccagattactgctctagttgaggatgctcttaataaatcaagctttgagagttatagc
cccagggcgcgtgattcactatcatgttggacacctgattgcattggatttaatttaatc
gaggcagttttatgccatatatgtcgaaaggaacgaccaggtgctgttctagtgttcatg
actgggtgggaggatatcagctgtttgagggatcaacttaaggctcatccccttttaggt
gatcctaacagggttttgctaataacttgccatgggtcaatggcgacatccgaacagaaa
ctcatatttggaagaccacctcctaatgttcgtaaagtagttcttgctacaaatatggca
gaagcaagcattacaatcaatgatgtggtttttgtcgttgattgtggaaaagcaaaagag
acctcatatgatgctttgaataatacaccttgtctactaccttcttggatatcgcaagca
tctgctcggcaaagaaggggcagggctggtcgggtgcagccaggcgaatgcttccacctt
taccccagatgtgtttatcatgcttttgcggaatatcaacttcctgaacttctcagaact
cctttaaactctctctgcttgcaaattaaaagtctgcaggttcctagtataggggaattc
ttgtcagctgccttgcagccaccggaaccacttgctgttcaaaatgccattggctttctt
acatcgattggggcattagatgataatgaaaatttgacaagtctcggaaaatatttgtca
atacttccagtagatcccaaactagggaaaatgctgattatgggtgccgtgtttcattgc
tttgatcctgttcttacaatagtgtctgggcttagcgtcagagatcctttccttttgcct
caagacaaaaaggatttagcagggacagcaaaatctagattctctgcaaaagattacagt
gatcatatggctcttgttcgtgcatatgaaggatggaaagatgcagaacgagaaggatca
gcgtatgaatactgctggagaaatttcctttctgcccaaacacttcaggctattcattct
cttcggaagcagtttaactacattttgagagatgctggcttggtggatgcagatgcaagc
attaacaacaagctaagtcacaaccagtccttggttcgtgcaatcatatgttctggactt
ttccctggaatagcgtctgtagtgcaccgagagacatccatgtctttcaaaacgatggat
gatggccaggttttactatatgctaattctgtgaatgcacgttaccaaacaattccctac
ccctggctggtctttggtgaaaaagtaaaggtcaatactgttttcatacgtgattccacc
ggtgtatccgattcaatactgatcctttttggtggttccttgaaccatggggtccaggct
gggcatttgagaatgttggaaggttatattgacttcttcatggatcctagtttggtggac
tgctatttgaagcttaaggaagaacttaatgagcttattcaaaagaagcttcaagatcct
agccttgatattcacaaggaagggaagtaccttatgcttgctgttcaagagctagtatcc
ggagatcaatgtgaaggaagatttgtatttggccgtgacagcaagaggccaaaggagtct
ggtgataacagcagattcacaaaagacggaaccaatcctaagagtttgctacaaactctg
ttgatgagagcaggacactcccctccaaaatataaaacaaagcaccttaagtcgaatgaa
ttcagagcattggtggagttcaagggcatgcaatttgttgggaaacccaagaaaaataag
cagcttgcagaaagggatgctgctatagaagcactggcctggttgactcacacctcagac
aatagtcgtgatgaagagaacaactcccctcctgatgtcactgacaacatgctgaaactt
cttgggaaacgcagaagatcaaaacgtcagtctggttga
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