Prunus persica (peach): 18785559
Help
Entry
18785559 CDS
T03092
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pper
Prunus persica (peach)
Pathway
pper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18785559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pper04121
]
18785559
Enzymes [BR:
pper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
18785559
Ubiquitin system [BR:
pper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18785559
Multi subunit type E3
ERAD complex
18785559
LMBR1L-GP78-UBAC2 complex
18785559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-C3HC4_4
zf-RING_Vps41
E3_UbLigase_EDD
zf-HC5HC2H
Endonuclease_7
Kazal_1
PHD
FANCL_C
Motif
Other DBs
NCBI-GeneID:
18785559
NCBI-ProteinID:
XP_007220561
UniProt:
M5XRW2
LinkDB
All DBs
Position
G2:27836128..27841397
Genome browser
AA seq
587 aa
AA seq
DB search
MGLRYIAISAVCTAISFAGLQLWTETSLVKLKSDGLIGDNLIPAANFGHVVDLLLGSYAT
VGLLANFVLNAFVLLVLFLKTIFFVELYPSETRKLVERLINYVIYKGTFLPLVIPPTIYH
AGLWSVWLIVLCSLKMFQALARDRLERLNASPSATPLSYFRVYSVLLLVLTVDVFWIRLC
VVIYKTLGLSMFLLLLFEPFSIAFETLQAILVHGFQLLDIWIHHSAWNSENCERSKLFDT
SAAGLLLEWKGSLTRNLGFVLDMATLLMALGHYVHIWWLHGMAFHLVDAILFLNIRALLS
AIVKRIKGFVKLRKALGALHAALPDATSEELRTYDDECAICREPMAKAKKLHCSHLFHLA
CLRSWLDQGLNEIYSCPTCRKPLFVGRTENEVHPRNEETSSDEQLARQISSGLDRQNSSG
HTIPTGAFPNQAQNLTEGGPWRGAGLDSNWLHNWPSEGVDGAGPSTAIGSVGLGRVQMMM
RHLASVGETYAQTALEDGAWSLWPMSPSQVAATGPSNPPADDGRYHGGARSLHIRTPTRT
VNDNLANILAMAETVREVLPHMPDDLIFQDLQRTNSVTVTVNNLLQM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcggtatatagccatctctgcagtatgtacggcgataagctttgcgggtctc
caattgtggacagaaacttctttagttaaactaaaatcagatggactaattggagataat
ttgattcctgcggccaattttggacatgtagttgatctgcttttgggttcttacgccact
gttggactgctggcaaattttgtactcaatgcatttgttttactcgttctatttctcaag
actatattctttgtggagttgtatccttctgaaactcgcaaattggtcgaacgccttatc
aattatgttatttacaagggcacgtttctaccactggttattcctcctacgatatatcat
gcaggcctgtggtcagtctggttgattgttctttgttctctaaagatgtttcaagctttg
gctagagatcgacttgaacgattgaatgcatctccttctgccacaccattgtcatatttt
cgtgtgtattcagtgttattgttggttctcactgttgatgttttctggataaggctgtgt
gtggtgatatataaaactctgggtttatccatgtttctcttgttattatttgagcctttc
agtattgcatttgaaacactgcaggctattttggtgcatggatttcagttacttgatata
tggattcatcattcagcatggaacagtgaaaattgcgagaggtccaaattatttgatacg
tcagctgctggtttattgttggaatggaaaggcagtcttactcggaatttgggctttgtc
ctagacatggcaacattgttaatggcacttggtcactatgtgcatatttggtggcttcat
ggcatggcattccatctagtggatgcaatcctttttctaaacatacgtgccttgctaagt
gcaattgtaaaacgtataaaagggttcgtcaaactaagaaaagccttaggcgctcttcat
gcagcacttccagatgcaacgtctgaagaactacgaacatatgatgatgaatgtgcaatt
tgtagggaacctatggctaaggctaaaaaactacactgtagtcacctttttcatcttgcg
tgcttgagatcttggttggaccaaggtttgaatgagatatattcatgtccaacttgtcgc
aagccactttttgtaggcagaactgaaaatgaagtacatccccgcaatgaagaaacttca
agtgatgagcagcttgctcgtcaaataagttcaggacttgatcgacaaaatagttctgga
catacaatacctactggcgcattccccaatcaggctcagaatcttacagaaggtggtcca
tggaggggtgcaggactggattcaaattggttgcataattggccaagtgagggagttgat
ggggcaggtccttctactgctatcggatctgttggactggggagagttcaaatgatgatg
aggcatcttgcatctgtcggagaaacttatgcccagacggcccttgaagatggtgcttgg
agcctatggcctatgagtccctctcaggttgctgcaactggtccatctaatcctcctgct
gatgatggaagataccatggaggagcacggagcttgcatattagaactcccacacgtact
gtgaatgacaacctagcaaacatacttgctatggctgagacagtgagggaagttctgcct
catatgccggatgacctaattttccaggatttgcagagaacaaattctgttacggttact
gtgaataatcttctccaaatgtga
DBGET
integrated database retrieval system
