KEGG   Prunus persica (peach): 18785925
Entry
18785925          CDS       T03092                                 
Name
(RefSeq) flowering time control protein FY
  KO
K15542  polyadenylation factor subunit 2
Organism
pper  Prunus persica (peach)
Pathway
pper03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18785925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pper03019]
    18785925
Messenger RNA biogenesis [BR:pper03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     18785925
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_DCAF4 eIF2A Beta-prop_SPT8 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_HPS5 WD40_like WD_LRWD1 PROPPIN WDR54
Other DBs
NCBI-GeneID: 18785925
NCBI-ProteinID: XP_007220674
LinkDB
Position
G2:3681018..3692981
AA seq 728 aa
MMYPDPQQQHHQQQHQHQQHQQQGGEFHRGPPPQAPMMRQPSASSTNMAPEYHHPSGPAP
PLPPYDAHPDGFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDARDRTVLQPTPAAAID
MLPTVAYSDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSF
NFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDLSF
CKTDLKFCSCSDDTTVKVWDFARCQEERTLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKL
WDAKSGRELCSFHGHKNMVLSVKWNQNGNWVLTASKDQIIKVYDIRAMKELESFRGHRKD
VTALAWHPFHEEYFVSGSFDGSIYHWLVGHDTPQVEIPNAHDNSVWDLAWHPIGYLLCSG
SNDHTTKFWCRNRPGDTGRDKFNIGQNQGFGEQNPAFGGRMTGNFPVPEGPPTPGPFPPG
LTRNEGTIPGVGVAMPLSLDASTQGEQQQPHALSMPSGAPPLPPGPHPSLLAANQQQQYQ
QNPQQIPQQQHQQHQAHPQQMPPMPLPPPNMPHLQPPSHLPLLPHPHLHRPPPQMPPLGM
PSSVPGSLPMPSSVPTSHSMQLGMQGTMNQMVHPLPQGHYMGMNPMHSGSLPTSGASAPV
GGFANGMPNMQGPSNASGGQMYPQGGAFNRGQPGQIPMHPGYNPYQTRGQSGMPQPPPGP
PPHGQAPQ
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgatgtaccctgatcctcaacagcaacaccaccaacagcagcatcagcatcagcagcat
cagcagcaaggtggggaatttcacaggggccccccgccgcaggcaccaatgatgcgtcag
ccgtcggcctcttcaactaatatggccccagagtatcaccacccatctggccccgctcct
cctcttcctccttacgatgctcatcctgacggttttgctgcaaaaaggatgagaaagctt
acccagaggagagcagttgattacactagcactgtggtgcgatatatgcagattcgaatg
tggcagcgtgatgcaagggataggacggtattgcaacctacaccagcagcagcaattgat
atgttgccgacagttgcgtattcagataatccctccactagttttgctgcaaagtttgta
catacgtccttaaacaaaaatcgttgttcgattaatcgggtcttgtggactcctacaggg
agacgtcttattaccggctctcaaagtggggaattcactctttggaatggacaatcattt
aactttgaaatgattcttcaggcgcatgatcaagcaatcaggtctatggtatggagtcat
aatgacaattggatggtctctggtgatgatgggggctcaataaagtattggcagaacaac
atgaataatgtgaaggccaataaatctgctcataaagaatctgttcgtgatttaagcttc
tgtaagactgacttgaagttctgttcctgttctgatgataccactgttaaagtttgggat
tttgcacgttgtcaagaagagcgcacattgactggccatggttgggatgtgaagagtgtt
gactggcaccctaccaaatctctactagtttcaggtgggaaagacaatcttgtcaaactt
tgggatgctaagtcagggcgagaactctgttcatttcatggccacaaaaatatggtgctc
tctgttaaatggaaccaaaatggtaactgggtgctaacggcttccaaggatcaaatcatt
aaggtttatgacataagggctatgaaggaacttgaatcttttcgtggccatcgaaaggac
gtgactgctctggcttggcatccgtttcatgaagaatattttgtcagtgggagttttgat
ggatccatttaccattggcttgttgggcatgatactccccaggttgaaattcctaatgca
catgataacagtgtgtgggatcttgcatggcatcctattggttatcttctctgcagtggt
agcaacgatcacactacgaagttttggtgcagaaataggccgggagacaccggtcgtgat
aaatttaacattggtcagaatcaaggttttggtgagcagaaccctgcttttggtggtcgc
atgactggtaactttccagtacctgaaggaccaccaactccaggaccatttcctcctggg
ttgactcgaaatgaaggaacaattccaggtgttggagttgctatgccgttatctcttgat
gcatcaactcagggagagcaacagcaacctcatgcactttcgatgccttcaggggctcct
cctctccctccaggtccacacccctctcttcttgctgctaatcagcagcaacaatatcag
caaaatcctcaacagatcccacaacagcaacatcaacaacaccaagctcacccacagcaa
atgccccctatgcctttgccacctccaaatatgccacatctacagcctccatcccattta
ccgttgctgccccatccacatttacatcgcccaccaccccaaatgcccccactcgggatg
ccatcatcagtgcctggatccttgcctatgccttcatcagttcctacctcacattcaatg
caactgggaatgcaaggtacaatgaaccagatggttcatccattgccgcaaggtcattac
atgggcatgaatccaatgcactcaggatccctacctacaagtggagcatctgcacctgtt
ggaggttttgcaaatggtatgccaaacatgcagggcccatcaaatgcaagtggaggccaa
atgtatcctcagggtggcgcctttaatcggggtcaacctgggcaaattccaatgcatcca
gggtataatccctaccagactaggggtcagtctggtatgcctcaacctccaccaggtccg
ccaccgcacgggcaagcacctcagtag

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