Prunus persica (peach): 18786105
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Entry
18786105 CDS
T03092
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18786105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18786105
Spliceosome [BR:
pper03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
18786105
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
18786105
NCBI-ProteinID:
XP_007220565
UniProt:
M5X740
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All DBs
Position
G2:complement(25212511..25217079)
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AA seq
885 aa
AA seq
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MEKERSSKRHREDRDRDHHKHRSRDADEKRSSKDSDNHRHHHRSDRDSKRERSHEPRDHK
SRRERSREPSDDRDIARDQRERSYDPRGEREGSRERSRHRETKRERSEEREEYRRKRKER
ERSEGRDGDVVDFDDKKRARVSEEERKDRKRFEEDGKELNGGQRQSRRFEDRRVKEEEDG
DYGGAVERSNELNVNASEVKKEEVGDYQLGNFQGDTTTPNGSGWMGNGAALEPTNASRIV
PETSFAPSHPLPTKVSSIYTTNENKGVSITRSHEVHGKSSTDGTSSTAGRSGNLSLDDVE
KIKKALQKQKELTEKLKKIPQLNKGANARKDASQNLGSKELKPPSATAGILHAPAPSTTG
GTAAPGVRFDSSKLPIAPAASSTSGVIAEAGLTAVPNLEAVKKAQELAASMGFRQDPQFA
PLINLFPGQVATDVAAPQKPTKAPVLRLDALGREIDELGNLVNATKPNNLSTLKVNINKQ
KKDAFQILKPELDVDPESNPFFDPMMGINKTKILRPKRMNFQFVEEGKWSRDAEHIKLKS
KFGEAQAKEQKAKQAQLAKAKAAPDINPNLIEVSERVITKEKPKDPIPEIEWWDVPLLHS
GTYNEVIDGAVVENKLKTEKITIYVEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKR
LAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID
RNIARKLTPAERREKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGS
AVISDGMNVVVVEGGSKSIKRYAKVMLRRINWAEAVKDEEEEDDDVNNDKPANKCVLVWQ
GSVARPCFNRFSVHECMTEAAARKIFADAGVAHYWDLAVNFADDE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagagatcgagcaaacgccaccgcgaagatcgagacagagaccaccacaag
catcgcagccgtgacgccgatgaaaagcgatcatcaaaggactccgataaccatcgccac
caccatcgatcggaccgcgattccaagcgcgagcgctctcacgagccccgagaccacaaa
tctcgtcgcgaaaggtcacgcgagccgagcgacgaccgcgatatagcacgtgaccaacgg
gagcggtcctacgacccgaggggcgagagagaggggagccgagagaggtccaggcatcgc
gaaacgaagcgcgagaggtcggaagagagagaggaatatagacgtaagaggaaagagagg
gagaggagtgagggtagagatggggatgttgttgattttgacgataagaagagggctagg
gtttcggaggaggagaggaaagataggaagcgatttgaggaagatgggaaggaattgaat
ggaggtcagagacagagtaggaggtttgaagaccgtcgagtgaaggaagaagaggatggt
gattatggcggagccgttgaacgcagcaatgaattgaatgtgaatgcaagtgaggttaag
aaagaggaagtgggtgattaccagcttggtaattttcagggcgacaccaccaccccaaat
gggagtggttggatgggtaatggtgctgctctggaacctactaacgcatcaaggattgtg
cctgagacctctttcgcacctagtcatccccttcctaccaaggtatcttcgatttatacc
acaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaatctagt
acagatggaacatcttcaactgctgggagaagtgggaatctgtctcttgatgatgtagaa
aaaattaagaaagctttacaaaagcagaaggaattgactgagaagctgaagaagattccc
cagttgaacaagggtgccaatgcaagaaaagatgctagccagaacttgggatcaaaggag
ctgaaaccaccatctgccactgctggaatactgcatgcaccggccccatcaacaactggt
ggtacagctgctccaggggtaagatttgattcatcaaaactacccattgcaccagcagct
tcgtctacaagtggcgtgattgcagaagctggccttacagccgttcccaaccttgaagct
gttaaaaaagcacaggagcttgctgccagtatgggtttccgccaggacccccagtttgct
cctcttataaacttgtttccaggacaggtggcaactgatgttgctgcccctcagaagcct
actaaggcccctgttcttcgtcttgatgcccttggaagggaaatagatgaacttggaaat
ttagtgaatgcgactaaaccaaacaacctcagcactctaaaggtcaatattaacaaacag
aagaaagatgcattccaaattcttaaacctgaattggatgtggatcctgaatcaaatccc
ttttttgatccaatgatgggtattaataaaaccaagattttgaggccaaagaggatgaat
ttccagtttgtagaggaaggaaaatggtcaagagatgctgagcatataaagttgaagagt
aaatttggagaagcacaagccaaagagcaaaaggcgaagcaggcacagttggcaaaggca
aaggcagcaccagatattaatccaaatttgatagaggtatcagagagagttatcaccaaa
gaaaaaccaaaggatccaattcctgaaattgagtggtgggatgtgcccctattgcactct
ggtacttataatgaagtcattgatggcgcagtagtggaaaataaattaaagacggagaaa
atcaccatctatgttgaacatcctcagcctatcgagccccccactgagccagcccctcca
ccgcctcaaccactgaagctgaccaagaaggagcagaaaaaactccgtacacagaaacgc
ctggccagagagaaagataggcaggagatgattagacaaggcctgatcgaacccccaaag
ccaaaagtgaaaatgagtaatttgatgaaagttcttggctctgaagcaacccaagatcca
accaggcttgaaaaggagattcggagtgcagctgctgagcgtgaacaagctcatatagac
aggaatattgcacgaaagctcactcctgccgagcgccgtgagaagaaagaaaggaagctt
tttgatgacccaaataatgtggagaccatagtctcagtttacaggatcaatgaactgtca
catccaaaggcccgcttcaagattgatgttaatgcacgagagaaccggctgactggatca
gctgtgatctcagatggtatgaatgtagtggttgttgaaggtggcagcaaatctattaag
aggtatgctaaggttatgcttaggcgcataaactgggctgaagctgtaaaagatgaagaa
gaagaagatgacgatgtaaacaatgataagcctgctaacaagtgtgtgttagtatggcaa
ggaagtgttgccagaccgtgcttcaatagattttctgttcatgagtgcatgactgaagct
gctgcccggaagatttttgctgatgctggcgttgctcattattgggatcttgcagtcaat
tttgcagatgatgagtag
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