Prunus persica (peach): 18787073
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Entry
18787073 CDS
T03092
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
pper
Prunus persica (peach)
Pathway
pper03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
18787073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18787073
03019 Messenger RNA biogenesis [BR:
pper03019
]
18787073
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18787073
RNA polymerase I system
18787073
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
18787073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW2_Spt5
Spt5-NGN
Spt5_N
KOW
DUF4438
Motif
Other DBs
NCBI-GeneID:
18787073
NCBI-ProteinID:
XP_007218678
UniProt:
M5X1C3
LinkDB
All DBs
Position
G2:complement(5466264..5468418)
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AA seq
533 aa
AA seq
DB search
MARHRDEDDYEPDQVLDGDEEEEHEEEQGGQISRQKRRRSDFRDDDEAYGGGVSRKRRNK
RPIGSKFFDIEAEVDNDEEEEEEDEGEDDFIVDTGADLPEEEHDGRRMHRHRPLRPQEDE
QEEDVEALERRIQARYARSSPSRAEYDEEETTDLVVNQQALLPCVRDPKLWMVKCAIGRE
REAVVCLMQKYIDKPKLNIKSAVALDHLKSFIYIEADNEAHVREACKGLRNILALHKVNR
VPIGEMTDVLSVESKAIDVSRGTWVRMKMGTYKGDLAKVVGVDDVRQRVRVKLIPRIDLQ
AIANKLEGRQVVKKKAFVPPPRFMNIDEAKQLHIRVERRRDPVTGDYFESIDGMLFKDGF
LYKAVSMKSISSQNIRPTLDELEKFRKPGENGARLSTLFSNRKKGPFVKGDTVIVVKGDL
KNLKGWVEKVEGEIVHIRPEIKQLPKTLALNEKELCKYFEPGNHVKVVSGTLEGATGMVV
KVEQHVLIILSDITKEHIPVFADDVVESSEVTSASCYSDAGASTRLSKSTWAR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcacagagatgaagatgactacgaaccagaccaagttctagatggggatgaa
gaagaggaacatgaggaggagcagggaggacaaatatccagacagaagcggaggagatcg
gatttcagagacgatgatgaggcttatggtggtggtgtgagtcgtaaacggaggaataag
aggcctattgggtcaaagttttttgatatcgaggccgaggtcgataacgatgaggaggag
gaagaggaagatgagggcgaggacgacttcattgttgatactggagctgatctccctgaa
gaagaacatgatggtagaaggatgcatcgtcatcgtccattgcggccgcaagaagatgag
caagaagaagatgttgaagcgcttgagagaagaattcaagcgcggtatgcaaggtcatca
cctagtcgtgcagaatacgacgaggaggagacaactgatttggtggtgaatcagcaagct
cttttaccttgtgttagggacccaaagttgtggatggtgaaatgcgcgatcggtcgtgag
cgagaggcagttgtttgcttaatgcaaaagtatattgataaacctaaactgaacatcaag
tctgctgttgccctagaccacctcaaaagctttatatacattgaagccgacaacgaagcc
catgtgagggaggcttgcaaaggtctgcgcaatatacttgccctacataaggtaaaccgt
gttccgatcggagaaatgactgacgttctttcggttgaaagcaaggcaattgatgtttct
aggggcacatgggtcagaatgaagatggggacctataaaggagaccttgccaaggttgtc
ggtgtcgatgatgtgcggcagagagtcagggtaaaattaattccaaggattgatttacaa
gctattgcaaataaactggagggcagacaagttgtgaaaaagaaggcatttgttcctcct
ccacgctttatgaatattgatgaagcaaaacaactgcatattcgtgtagagcgtagacga
gatccggtgactggtgattactttgagagtattgatggcatgctgtttaaagatggtttc
ctgtacaaggcagtatcgatgaaatcaattagctctcaaaacatacgtcccactttggat
gaacttgaaaaattccggaaacccggggagaatggtgcccgtttgtcaactttattttca
aacagaaagaagggaccctttgtgaagggtgatacagttattgttgtcaagggagatctt
aaaaatttgaaaggatgggttgagaaagttgagggagagattgttcatatcaggcccgaa
attaaacaacttccaaaaactcttgccttaaacgaaaaagagctttgcaaatacttcgaa
cctgggaatcatgtgaaagttgtatctggtactctggaaggtgcaactggtatggttgtt
aaggttgagcagcatgtgctcatcattttatccgatataaccaaggaacatatccctgtg
tttgctgatgatgttgtggagagttctgaggtgacatccgctagttgctattctgatgca
ggagcatctacaaggctctccaagagtacttgggcccgttag
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