Prunus persica (peach): 18787188
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Entry
18787188 CDS
T03092
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B isoform X2
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pper
Prunus persica (peach)
Pathway
pper04120
Ubiquitin mediated proteolysis
pper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18787188
04120 Ubiquitin mediated proteolysis
18787188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pper04121
]
18787188
Enzymes [BR:
pper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18787188
Ubiquitin system [BR:
pper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18787188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
FlxA
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-HC5HC2H
zf_RING_Vps8
Prok-RING_4
DUF5320
Motif
Other DBs
NCBI-GeneID:
18787188
NCBI-ProteinID:
XP_007220658
UniProt:
M5X723
LinkDB
All DBs
Position
G2:complement(30067877..30071929)
Genome browser
AA seq
547 aa
AA seq
DB search
MMRLQTYAGISLVATLAIIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTMWQL
TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHVRIVSFLGFLLVVDSLFLYSSISNLIKTQKASVSLFFSFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYVELIRDLLHLSMYLCFFLVIFMYYG
VPLHLIRELYETFRNFKIRLGDYIRYRKLTSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLLCGHLFHVPCLRSWLERQHTCPTCRALVEPPENGAGTAGGHRGSRSDAHQQGTGT
TAQGGGVAGGVAGDNLSQHEARLRAAAAAASIYEKSHVYPSANRLVWSPGYVALPQVQRQ
MADSANTESSGVLHPQLATPGGPSNLSSPQFPHYMFVPFEVPDVAYEERLGGDPNITASQ
LEAQKKFLQHQIEILQNQLKTLQKPKPKESMDTGPSASLDGKGKNVESSSSSVSDCGRHV
ELEEIDS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacctatgcggggattagcttggtagcaactctagcgattatttat
catgcatttagcagtagaggccagttttacccggccatggtttatttatcaacctccaag
atcagtttggtgctgcttctcaacatgggtctggtcattatgtgtactatgtggcaatta
actaaaaagctcttccttggatcactccgagaagccgaggtggagaggcttaatgagcag
tcatggagggaagtcatggagatcctctttgctattactattttcaggcaagacttctca
gtctcctttcttgctatggtcacagctctgctgttgatcaaggctttgcattggttggct
cagaagagggttgaatacattgagactaccccatccgtgcccatgctgtctcatgttcgg
attgtctcctttttgggattcttgcttgttgtagatagtctctttttgtacagttcaatt
agcaatttgataaagacacaaaaggcttcggtttccctcttcttttcatttgagtacatg
atactagcgacaacgacggtgtcaacatttgtgaaatatgttttctatgttagcgacatg
cttatggagggacaatgggagaagaagcctgtctacacattttatgtggaacttattcgg
gacttgctccacttatccatgtatctgtgcttctttcttgtgattttcatgtactatggt
gtgccattgcacttaatacgtgagctctatgaaacatttaggaactttaagattcgcctt
ggtgattacattcgttatcgaaagctcacttcgaacatgaatgatcgattcccagatgct
acgcctgaagagcttaatgcaagtgacgcaacttgcatcatttgccgtgaagagatgaca
acagccaagaaactattatgtggacacctttttcatgtgccttgcctgcgatcatggtta
gagcgacagcatacctgtcctacttgcagagccctagttgaacctcctgaaaatggggca
ggtacagctggaggacataggggatcacggtccgatgctcatcaacaggggactggcaca
acagctcaaggtggtggagttgctggtggagttgctggtgataatctcagtcaacatgaa
gccagactccgagctgctgctgctgctgcatcgatatatgagaagtctcatgtatatcca
tctgcaaacagactagtatggtctcctggatatgtggcacttcctcaggttcaaagacaa
atggccgactccgctaacactgaatctagtggagtattgcacccacagcttgcaacccct
ggtggaccttcaaacttgtcctcccctcaatttccacattacatgtttgtcccatttgag
gttcctgatgtggcctatgaggagaggttgggcggtgatccgaatataacagcttctcaa
ctggaggcccagaaaaaatttctccaacaccagatcgagatcctgcagaatcagctcaaa
actttacagaagccaaaaccgaaggaaagcatggacacagggccatcagcatctttggat
ggcaaaggaaagaatgtcgaatcttcgtcctcgtctgtttcagattgtggacgtcatgtg
gagcttgaagagattgattcatag
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