Prunus persica (peach): 18787307
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Entry
18787307 CDS
T03092
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18787307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18787307
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18787307
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
18787307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Microp_apicomplexa_6
Motif
Other DBs
NCBI-GeneID:
18787307
NCBI-ProteinID:
XP_020412129
LinkDB
All DBs
Position
G2:19351204..19370656
Genome browser
AA seq
2394 aa
AA seq
DB search
MLKFSPTTASQIRFLLQSLNDANSDSVLRELSQFTEYGIEGSILLLQTCLGHLTNYGTDL
KNVALERVLSSVFKYLLDRPNFNTVFCESLRNTEINEGILENFSNALHLSVCEKIAIGLA
LSDSENLDSRTCGKNFCMAQIQKLCENPVAMNSSEQIQNTVMFLQRSDGLSKHVDSFMQM
LSLLQLKDDSLFVLTPLLSDELRDANFLSNVGLFHESGENDFDAILAEMEKEMSMGDIMK
ELGYGCTVDSSQCKEILSLFLPLTEFTISKILGMIACTHAGLEDNQNTFSTFRLALGDST
LSDMPMLNTWNIDVLVDTIKQLAPGTNWIRVMENLDHEGFYIPNQEAFSFFMSVYQHVCQ
EPFPLHVICGSVWKNTEGQLSFLRHAVSAPPEVFTFAHSVRQLAYIDAVHGHKLQLGHAN
HAWLCLDLLDVLCLLAERGHALAVRSMLEYPLKHCPEVLLLGMAHINTAYNLLQYEVSFT
VFPMIVKNSMGSGMINHLWHINISLVLRGFVDAHNSDPDSMARILDICEELKILSSVLEM
IPSPFSIRLAALASRKEFIDLEKWLSNNLNTYKDTFFEECIKFLKEIQFGGSQDFSTRPF
QHSGAVSNLYVDTATTFSKVLKAHVGLITSSQLTEEMERLSVTIMDSNPRLQNGGTTESS
TDGYADDIEAEANSYFHQMFSGQLTIDSMVQMLARFKESSVKREQSIFECMIANLFEEYR
FFPKYPERQLKIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQ
FVDRLIEWPQYCNHILQISHLRSTHSELVAFIEQALARISSGHSDSDGSNHASAHHHSPS
QASSGNVELNGSSILHTGQQLSSPLQLQQRHESSLDDRHKASTSSNDIKPLLSSVVQPSV
IPLGDAPSIQKSQSAVSAPAMLSSSSPGFVRPSRGVTSTRFGSALNIETLVAAAEKRETP
IEAPASEVQDKISFIINNISVANVEAKSKEFTEVMKDQYHPWFAQYMVMKRASIEPNFHD
LYLKFLDKVNSKGLNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRN
QVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEI
YSMPNLKMNLKFDIEVLFKNLGVDLKEITPSSLLKDRNRELEGNPDFSNKDVGASQPQMV
AEVKSGIISPLNQVDLPLEVAPSSGSHTHLLPQYGTPLHLPPGTFNEDEKLAALGLSDQI
PSAQGLLQATPSQSPFSVSQLPTQIPNIGTHVIINQKLTGLGLQLHFQRVVPIAMDRAIK
EIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIFNAAHLMVASLAGSLAHVTCKEPLR
SSISTQLRNSLQGLNIASDLLEHAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQL
SLRRKRDGVGATFFDTNIYTQGSMGVVPEALRPKPGHLSLSQQRVYEDFVRLPWQNQSSQ
NSHVLPAGTPASGQLNTGYSAGPGSKFDAVSRPLDEGIEPNSALHLSASSIHVGVGDGVS
QQSSENDSVIGSFPSAASAPELQSVESSDAVKESGVSSQPQPSPAVTERLGSNISEPSLN
TRDALDKYQIVAQKLEALVTSDARDVEIQGVIGEVPEIILRCVSRDEAALAVAQKVFKGL
YENASNHIHVGAHLAILTAIRDVCKLVVKELTSWVIYSEEERKFNKDITVGLIHSELLNL
AEYNVHMAKLIDGGRNKPATEFSISLLQTLVIEESKVISELHNLVDALAKLAAKPGSPES
LQQLVEMVKNPASNVAAPSAINVGKEDKARQSRDKKAPVHSPVNREDFSNVESVEPDPAG
FREQVSMLFAEWYRICELPGANDAACAHFILQLHQNGLLKGDEMTERFFRVLTELSVAHC
VSSEVMNPGTLQTPQQVQSLSFLAIDIYAKLVFSILKGSNKLFLLTKILTVTVRFIQKDA
EEKKASFNPRPYFRLFVNWLLDLGSLDPVVDGANFQILSAFANAFNALQPVKVPTFSFAW
LELVSHRSFMPKMLAGNGQKGWPLIQRLLVHLFQFMEPFLRNAELGVPVHFLYKGTLRVL
LVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEIS
QSPRILSEVDATLKLKQMKTDVDEYLKTRQQGSSFLTELKQKLLLPSNDVALAGTRYNVP
LINSLVLYVGMQAIQQLQSRTPHAQSPQSVPFAVYLVGAALDIFQTLIVDLDTEGRYLFL
NAIANQLRYPNTHTHYFSFIVLYLFAESNQHEIIQEQITRVLLERLIVNRPHPWGLLITF
IELIKNPRYQFWNRAFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGWVSESAH
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagttttcgccgaccaccgcgagccagattcgctttctcctccaaagcctcaac
gatgccaactctgactctgtactccgagagctctctcagtttactgaatatggaattgag
ggaagcattttgctgctccagacctgtctgggtcatctcactaattacggaacagacttg
aagaatgtggcactggaacgggttctttcctcagtttttaaatatcttcttgacagacct
aatttcaatacagtgttttgtgagtccctaagaaatacagagatcaatgaaggaattcta
gagaatttctcgaatgcattacacctgtctgtatgtgagaagattgccattggtcttgcg
ttgtcagattctgaaaacctagacagcaggacatgtggcaagaacttctgtatggctcag
atccagaagttgtgtgaaaatcctgttgcgatgaactcttctgagcaaattcagaacact
gttatgttcctccagcggtctgatggcctttccaagcatgttgattcctttatgcagatg
ttatctttattacagctgaaagatgacagtttgtttgttctaactccattgctttcagat
gagcttcgtgatgccaattttttgagcaatgtgggtttgttccatgaaagtggagaaaat
gattttgatgctattttagcagaaatggagaaggaaatgagcatgggagatataatgaag
gaattaggttatggatgcacagttgattcatctcagtgtaaagagattttatcccttttc
ttaccactcactgagtttactatctcaaaaatacttggcatgattgcctgtactcacgct
ggtctcgaggacaatcagaatacattttcaaccttccggttggcacttggtgacagcact
ttgtctgacatgcctatgttgaacacctggaatattgatgtccttgtagatacaatcaag
caacttgctcccggcaccaactggatacgggttatggaaaatttggatcatgagggattt
tacattcctaatcaggaggctttctcttttttcatgtctgtatatcagcatgtgtgtcag
gagccctttcccctccatgtcatctgtggatctgtctggaagaacaccgagggtcagcta
tcctttcttagacatgctgtatcagcaccacctgaagtgtttacctttgctcattctgtt
aggcagctggcctatattgatgctgtgcatggccataagcttcaacttggacatgcaaat
catgcgtggttgtgtcttgatcttttggatgtactgtgtctactagctgagaggggtcat
gctcttgcagttcgatcgatgcttgagtatcctcttaaacactgtcctgaagtcctgctt
cttgggatggcacatataaatactgcatacaacctgctgcaatatgaagtgtcttttact
gttttccccatgatagtaaaaaattccatgggcagtggcatgattaaccacctctggcat
attaacatctcgctggtgctgcggggattcgttgatgctcacaatagtgatccagatagt
atggctagaatattggatatctgtgaagagctaaagattctgtcatccgtcttagagatg
attccttccccttttagtatcagactggcggctcttgcttccagaaaagagtttatagac
cttgagaagtggttgagtaataatttgaatacatataaagatactttctttgaggagtgc
atcaagttcttgaaggagattcaatttggtggatcacaggatttttccaccagacctttc
caacattctggtgctgtgtcaaatctttatgtggacactgctactacattctcgaaggtt
cttaaagctcatgttggcttgattacctctagccaacttactgaggagatggaaagattg
tctgtaacaattatggattctaatccaaggctgcagaatggtggcactacagagtcatca
actgatggatatgcagatgatattgaagcggaagcaaactcttacttccatcaaatgttt
tctggtcagttgacaattgattcaatggtccaaatgcttgcccgattcaaggaatcttct
gtaaaaagggaacagtcaatttttgagtgcatgattgctaatctgtttgaagagtacaga
ttcttccccaagtatcctgaaagacagctcaaaattgctgcagttctctttggttctgtc
atcaagcaccagcttgtaactcatctgactcttgggattgctctgcgtggtgttttagat
gcattacgcaagcctgcggattcaaaaatgtttgtgtttggaactaaggctttggagcag
tttgtggatcgtctgattgagtggccgcagtattgcaatcacattcttcaaatatcacat
ctgcgtagtactcattcagagctcgtggctttcattgaacaggctcttgctaggatttca
tcaggccattcagactcagatggaagcaaccatgcttctgctcatcaccacagtcccagt
caagcttcctcaggaaatgtggagttaaatggttcgagcatcttacatactgggcagcaa
ctatcatctcctctccagctccaacagagacatgaaagttctcttgatgaccgtcataaa
gcctcaacttcatccaatgacataaagccacttttatcttctgttgtgcaaccttcggtt
attcctttaggcgatgctcctagtattcagaagtcacaaagtgcagtcagtgctccggca
atgttgtcttcttcttcccctggttttgttcgtccttcacgaggagttacttctacaagg
tttggctctgctttgaacatcgaaacattagttgctgctgctgagaaaagagaaactccc
attgaggctccagcatcagaggttcaggacaagatatcatttataattaataatatttca
gttgctaatgttgaagccaagtcaaaggagtttacagaagtaatgaaagatcaataccat
ccttggtttgcgcagtatatggttatgaaaagggcaagcattgagccgaattttcacgac
ttgtacctgaaatttctggacaaagttaattctaagggtttgaataaggagattgttcaa
gctacttatgagaactgcaaggttcttcttggatcagagcttataaaatcaagctcagaa
gagcgctcgttgttaaaaaatttagggagctggcttgggaagcttacaattggaaggaat
caagtcttaagggctcgtgaaatagatcccaagtctttgattatagaggcatatgagaaa
gggttgatgattgcagttataccctttacttcaaagattctggagccatgccaaagtagc
ctggcataccaaccaccaaatccctggacaatgggtattcttggattacttgctgagatc
tattcaatgccaaacttaaagatgaacctgaagtttgacatagaggttctattcaagaat
cttggtgtggatttgaaggagataacaccaagttctcttctcaaggatcgcaacagagaa
cttgaagggaatcctgatttctctaacaaagatgttggagcatcccaaccacagatggtt
gctgaagtgaaatctggaatcatatctccactaaatcaagttgatctaccacttgaggtt
gcgccatcttctgggagccatacacatctattacctcagtatggcactcctcttcatctt
ccacctggtacctttaacgaggatgagaagcttgctgctttagggttgtctgatcagatt
ccttctgctcaaggactgttacaagctactccatcacaatcaccgttttctgtgagtcag
cttcccacacaaatacctaatatcggaactcacgtaatcattaaccagaagctaactggc
ttgggattgcaactgcattttcagagagtggttccaatcgcaatggacagagctatcaaa
gagatagtatctggtattgttcagcgcagtgtttctatagctacccagaccactaaggag
cttgttttaaaggattatgccatggaatcagatgagacgagaatatttaatgcagctcac
ttgatggttgcgagtttggcaggaagtctagctcatgtgacatgcaaggaacctttgcgt
agttcaatatcaactcagctcaggaattcccttcagggattaaatattgccagtgatctt
ctagaacatgctgtacaacttgttactaatgataatctggatcttggctgtgcagttatt
gaacaggctgcgactgataaggccatacaaacaattgacggggaaatagctcaacagctc
tcattaagaaggaagagagatggtgttggtgcaaccttttttgatactaacatctatact
caaggttccatgggcgttgtgccggaggcccttcgccctaaacctggccatttgtccctt
tctcaacagcgagtttatgaggactttgttcggctaccctggcagaaccagtctagccag
aactcgcatgttcttcctgctggtactccagcatcaggacaacttaacacaggctactca
gcaggccctggaagcaaatttgatgcagtttctcgtccgctggatgagggcattgaaccc
aattcagctctgcatcttagtgcttcctctattcatgtcggggtgggtgatggtgtttcc
cagcagagttctgaaaatgattctgtcattggttcatttccttctgctgcttctgcccca
gagctacaatcagtagagtcgtctgatgctgtaaaggaatctggagtttcttcacagcca
caaccttcacctgctgtaactgagcgtcttggaagtaacatttcagaaccttctctcaac
acgagggatgcattggataaataccagattgtggcacaaaagttggaagctctggtaact
agtgatgctagagatgtagaaattcagggagtcattggtgaagttcctgagattatactc
agatgtgttagtcgagatgaggctgccttggctgtggctcaaaaggttttcaagggttta
tacgagaatgcatccaaccatattcatgtcggtgctcatcttgcaatcctgactgccatt
cgtgatgtttgcaagcttgttgttaaggagctcactagttgggttatttattccgaggag
gagcggaagtttaacaaagatattactgttggccttattcacagtgaattgctaaacctt
gcagagtacaatgttcatatggccaaacttattgacggtggcaggaataagcctgcaact
gagttttccatttcccttctccaaactttggtgattgaagaatctaaagttatatcagaa
cttcataatcttgttgatgctttggcaaagctcgctgcaaagcctggatctcctgagtca
ctacagcagctggttgaaatggtgaagaatcctgcttctaatgtggctgctccatctgct
attaatgttggaaaggaggacaaggccagacaatctagagataaaaaggctcctgttcac
tctcctgtgaacagggaagactttagtaatgtggagtctgtggaacctgatcctgctggt
ttccgtgagcaggtgtcaatgctgttcgccgagtggtaccggatttgtgaacttcctggt
gcaaatgatgcagcttgtgcccatttcatcttacagttgcatcaaaatggtctgctgaag
ggggatgaaatgacagagcggtttttccgcgtcctcacagagctttctgttgcacattgc
gtgtcttctgaggtgatgaatccaggcacattgcaaacaccacaacaagtgcagagtctc
tccttccttgccattgatatctatgctaaacttgtcttctcaattttgaagggatcgaat
aaactatttctcttgactaagattttaacagtcacagtgagattcattcaaaaggatgca
gaggaaaagaaagcatctttcaatccaagaccatattttagattgtttgttaactggctg
ctggaccttggttctctggatcctgtggttgatggtgctaactttcagatcttgtcagca
tttgcaaatgcatttaatgctttgcagcctgttaaagttcctacattcagctttgcttgg
ctcgagttggtgagtcataggagttttatgccaaaaatgctcgctgggaatggccagaag
ggctggccccttatccaacgtttgctggtacacttgtttcaattcatggagccatttttg
aggaacgctgaactaggagttccggttcatttcctgtataaaggcacgcttagggtgctg
ctagtgctacttcatgatttcccagaatttctgtgtgattatcactttaccttctgtgat
gttattcctccaagctgcattcaaatgcgaaatatcattctcagtgcatttccccgtaat
atgaggctgccggatccatctactccaaacttgaagattgatttgcttgctgaaatcagt
cagtctccacgtattctttccgaggttgatgcaactctaaaattgaagcagatgaaaacc
gatgtggacgagtatctcaagacaaggcaacaaggttcttcatttctgactgaactgaag
caaaaattgctacttccatcaaacgatgttgccttggctggtactcgttacaacgtaccc
ctcatcaactcccttgtgctttatgttgggatgcaggctatccagcagcttcagtctaga
acacctcatgcacagtctccccaaagtgttccattcgctgtctatttggtgggtgctgct
ttggatattttccagactctgatagtggacctagatactgaagggcgctaccttttccta
aatgcgattgcaaaccaactgcgctatccaaacactcatacccattacttttcgttcatt
gttctttacttgtttgccgaatcaaaccagcatgaaattatccaggagcaaatcacaaga
gtactgttggaacgtctgattgttaatcgaccgcatccatggggtcttctgattaccttc
attgagcttatcaagaaccctagataccagttctggaaccgagctttcatacggtgtgcg
ccagagattgaaaaactctttgaatctgtctcaagatcctgcggcggtccaaaacctgtg
gatgaaagcatggtctcaggttgggtatccgagagtgcacactga
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integrated database retrieval system
