Prunus persica (peach): 18787316
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Entry
18787316 CDS
T03092
Name
(RefSeq) zinc finger CCCH domain-containing protein 40
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18787316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18787316
Spliceosome [BR:
pper03041
]
Complex B
Other components
Prp19-related factors
18787316
Complex C
18787316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_12
RRM_occluded
zf-CCCH
zf-CCCH_3
RRM_3
zf-CCCH_10
RRM_YTH1
zf-CCCH_4
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
18787316
NCBI-ProteinID:
XP_020413555
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All DBs
Position
G2:complement(24586322..24589182)
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AA seq
498 aa
AA seq
DB search
MAHRLLRNVEADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGR
DARFKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALAISSNDAIPKSDVNREFFAE
EHDRKARAGIDYESSYGKARPSDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGAECPYR
HEMPITGELSQQNIKDRYYGVNDPVAMKLLNKAGEMPSLEPPEDESIRTLYVGGLDERIS
EQDLRDQFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQAPKQDSEGTAEARQQAVAHSGLLPRAVISQQQNHLQDQPAPVHYYNMPPPPSQERSFY
PSMDPQRMGAIVPSQEGAPSGPTGSGENNSSAERQQRSQHYAFQNMPQPHAQYRQQFYPP
PYGYMPPPPAPYQQYPPQHHAGVTPPPSLPMNQQYQNSATPGPAHSGSTSSGSAPSNSGP
SGSTPSGSGSAQTGSSQQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaggttgctcaggaatgtggaggcggatggttgggaacgttcagactttccc
atcatctgcgagtcatgcttgggcgacaatccctacgtccggatgacacgagctgattac
gacaaggagtgcaagatttgcactcggccattcaccgttttcaggtggagacctggtcgt
gatgctcgatttaagaagtcagagatttgtcagacgtgcagtaagttgaaaaatgtttgt
caagtttgcctcttggatctggaatacggcttgccagttcaggttcgagatactgctctg
gccatcagttccaacgatgccattccaaagagtgatgtaaatagggagtttttcgctgag
gagcatgaccgaaaggctagagctggtatagactatgaatcttcatacggaaaggcacga
cccagtgacactattctgaagcttcaaagaacaacaccctattacaaaaggaacagagca
catgtttgcagtttctacattcggggtgagtgcacaagaggtgctgagtgtccttacagg
cacgaaatgcccataactggggagttgtcacagcaaaacatcaaagatcgttactatgga
gtcaatgatccagtggcaatgaagctgcttaacaaggctggagagatgccctccctggaa
cctcctgaggatgaaagcataagaactctatacgtgggtgggcttgatgaaagaatttct
gagcaggatttgagggatcaattttacgctcatggtgaaatagaatctgttaggatggta
ctccaacgagcatgtgcttttgtaacctacacaacaagagaaggtgcagaaaaggctgca
gaagaactctctaataaactggtaataaagggtttgagattgaagttaatgtggggtagg
ccccaagcaccaaaacaggactctgagggcacagctgaagctaggcagcaggcagtggct
catagtgggttgttgcctcgagcagtcatatctcaacagcagaaccatttacaagaccaa
cctgcaccagtgcactattacaacatgccacctccaccctcacaggagagatcattttat
ccatcaatggatcctcaaagaatgggggctatagttccatcccaggaaggggctcctagt
gggcctacgggttcaggcgagaacaattccagtgcagaaaggcagcaacgtagtcagcat
tatgcttttcaaaacatgcctcaaccacatgcccaatatcggcagcagttttatcctcct
ccctacgggtatatgcctcctccaccagcaccgtaccagcaataccctccgcaacatcat
gctggagtgacgccaccaccatccttgccaatgaaccaacagtaccagaattcagcaaca
ccagggcctgcacactcgggctctacatcatcaggatctgcaccatcaaattctggacct
tcggggtccacaccatctggttctgggtctgcgcagacagggtcatcacagcagtga
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