Prunus persica (peach): 18787405
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Entry
18787405 CDS
T03092
Name
(RefSeq) regulator of nonsense transcripts UPF2
KO
K14327
regulator of nonsense transcripts 2
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18787405
03015 mRNA surveillance pathway
18787405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18787405
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
18787405
mRNA cycle factors
P-body specific factors
18787405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
18787405
NCBI-ProteinID:
XP_007220295
UniProt:
M5X6D7
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All DBs
Position
G2:complement(24872297..24884332)
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AA seq
1182 aa
AA seq
DB search
MDHHEEESRAGGEPHGKQDDEEAAARREEIKKSIEAKMALRQSNLNPERPDTGFLRTLDS
SIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC
SLLHQRYKDFSPSLLQGLLKIFFPGKSGDDLDVDKNLRAMKKRSTLKLLLELFFVGVIED
GGIFVNIIKDLTSGEHLKDRDTTQTNLTLLASFARQGRMFINLPLSGPEIHEEFFKGLNI
TTEHKKFFRKAFQTYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSDENVSSYEKLRK
SYEQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDASSPAAGKDSSVLEAIWDDEDTR
AFYECLPDLRAFVPAVLLGEAEKSNDQSAKTQEQPTEPTLESDQSQQTAEDAGEASADVG
ALQEGKSIEKGKDKEEKDKEKIKDPDKEKGDRKGENEKEKLKSIEGTNLDALLQRLPGCV
SRDLIDQLTVEFCYLNSKANRKKLVRAVFNVPRTSLELLPYYSRMVATLSTCMKDVSSML
LAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNI
DVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPER
SARVTKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWGECEPYLLKCFMKVHKGKYG
QIHLIASLTAGLSRYHDQFAVSVVDEVLEEIRLGLELNEYGMQQRRIAHMRFLGELYNYE
HVDSSVIFETLYLILVFGHGIQEQDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLD
RFLMHFQRYILSKGVLPLDVEFDIQDLFAELRPNMTRYSSIDEVNAALVELEEHDRTVST
DKANNEKHSDTEKPSRRTTSNKKSVNGTEENGVRHGDHGDSDSDSGSGTIDPDGHDEEEL
DEENHGDGSDSEEEDDDGGGPASDEDDEVHVRQKVAELDPQEEANFELDLKAVMQESMEQ
RRLELRGRPALNMTIPMNVFEGSIKDHHGRGVGGESGDEALDEVSGGSKEVQVKVLVKRG
NKQQTKQMYIPRDCSLIQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQTLNYM
QSGGNRVAGRGSNWEGTSGRGGGTRHRYHGYSGGGVYYSRKK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccatgaggaggaatcccgtgctgggggtgaacctcatgggaagcaagatgat
gaggaagctgctgctcggcgtgaggaaatcaagaaatcaattgaggctaagatggctctt
cgtcaaagcaatttgaaccctgagaggcctgacacaggatttcttaggacactggattct
agcattaagcgcaacacagcggttattaaaaaactgaagcagattaatgaagagcagcgg
gaagggctgatggatgacttgagaggtgtcaacctaagcaaatttgtcagtgaagctgtt
actgctatttgtgatgccaagcttagatcatcagacatacaagcagcagttcagatctgc
tctctgcttcatcaaagatacaaagacttctccccaagcctacttcaaggtcttttgaaa
atcttctttcccggaaagtctggggatgacttagacgtggacaagaacctgagggccatg
aagaagcgaagcactttgaaactccttttggaacttttctttgttggagtcatagaagat
ggtggtatttttgtgaatatcattaaggatcttaccagtggagaacacttaaaggatcgg
gatactactcagacaaatttgactcttcttgctagttttgctcggcagggaagaatgttt
attaaccttccactctctgggccagaaattcacgaagagttttttaagggccttaatatc
acaacagagcataagaaattcttcaggaaggcatttcaaacatattatgatgctgcagca
gaactacttcaatccgagcatacttcacttcgccaaatggagcacgaaaattctaaaatc
cttaatgctaaaggagagctcagtgatgaaaatgtctcttcatatgagaaactgcggaaa
tcttatgaacaattgtaccgcaatgtctcatctttagcagaagcacttgatatgcagcct
ccagtaatgccagaggatggtcatacaactagggttactagtggagaggatgcttcatct
ccagctgctggaaaggactcttctgtacttgaagccatatgggatgatgaagatacaagg
gctttctacgagtgcttaccagatcttagagcgtttgttccggcggtattattgggagaa
gcggagaagagcaatgatcaatctgcaaagactcaagaacaaccaactgagcccacactt
gaatcagaccaaagtcaacagactgcagaagatgctggagaggcatctgcagatgttggt
gctttacaggagggcaaaagcatagagaaagggaaggacaaggaagaaaaggataaggag
aagattaaagatccggacaaagagaaaggcgatagaaaaggagagaacgagaaagagaaa
cttaaaagcatcgaagggacaaatttggatgctttactgcagaggcttcctggttgcgtg
agccgtgatcttattgatcagttgactgtagagttttgttatttaaattcaaaagcaaat
cggaaaaagcttgtgagggcagtgttcaatgtccccaggacatcattggagctactacct
tactattcacgcatggttgccacactgtcaacttgtatgaaggatgtatcttccatgctc
cttgcaatgctggaagaagagttcaacttcttaattaataaaaaggatcaaatgaacatt
gaaacaaagattaggaacattagatttattggagaactctgcaagtttaaaatcgcacca
gctggtcttgtctttagttgtttgaaggcttgtttagatgatttcactcatcataacatt
gatgttgcttgcaatcttcttgagacttgcgggcgttttctgtatcggtctcctgaaact
actgtgcggatggctaacatgttggaaatattaatgcgtttgaagaatgtaaaaaattta
gatcctcggcacagcacccttgttgaaaatgcttactacctgtgcaaaccgcctgagaga
tctgcacgagtcactaaagtccgtcctccattgcatcagtatataagaaagttgctattc
tcagatctcgataagtctacaatagagcatgtgctcagacaactgcgtaaactaccatgg
ggtgaatgtgagccatatcttttaaaatgctttatgaaggttcacaaagggaagtatggc
cagatccacttgattgcttcgctgactgctggtctgagtcgctaccatgatcaatttgct
gtatctgttgttgatgaggttttagaggagatcaggcttggcctagaattaaatgagtat
gggatgcagcaaagacggattgctcatatgcgattcttaggagagctatacaactatgag
catgtagattcttctgttatttttgagactctttacttgattcttgtctttggccatggc
atacaagagcaagatgtactggatccaccagaagattgtttccgcattaggatggttatt
actcttctggagacctgtggccactactttgaccgaggctcttccaagaggaagcttgat
cgattcttgatgcacttccagagatatatactaagcaaaggagtactcccactggatgtt
gaatttgacatacaggacttatttgcagaactacgccccaacatgacccgatactcatcc
attgacgaagtaaatgcagctctagtagaacttgaggagcatgatcgtactgtctccact
gacaaggccaataatgagaagcactccgacactgaaaagccttcaaggaggaccacctcc
aacaaaaagtctgtgaatggtactgaggaaaatggtgtaaggcatggagaccatggagat
agtgacagtgattcaggaagtggcaccattgatccagatggacatgacgaagaagaatta
gacgaagagaatcatggtgatggatctgacagtgaagaggaggatgatgatgggggtgga
cctgcatctgatgaggatgatgaagtccatgtcagacagaaggttgcagagctggatcct
caggaagaagcaaattttgagctagatctcaaagctgttatgcaggaaagcatggagcaa
cgcaggctagagctgcgaggccgacctgcattaaatatgacgataccaatgaatgtgttt
gagggttccatcaaggatcatcatggaagaggggttggaggggaaagtggagatgaggcg
ttggatgaagtctctggaggaagcaaggaggtgcaggtgaaagttcttgtgaagcgtggt
aacaaacaacaaacaaaacagatgtacatccctcgggattgctcgcttatacagagtacg
aaacagaaagaagcagcagagcttgaagagaaacaagacatcaagaggctggttttggag
tataatgatagagaagaggaggagcttaatggattggggaaccaaactttgaactatatg
cagagtgggggcaacagagttgctggccgtggcagtaattgggaaggaactagtggtaga
ggtggtggaacacgtcatagatatcatggttattcaggtgggggtgtttattacagccgg
aagaagtaa
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