Prunus persica (peach): 18787426
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Entry
18787426 CDS
T03092
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18787426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18787426
03036 Chromosome and associated proteins [BR:
pper03036
]
18787426
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18787426
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18787426
mRNA degradation factors
5'-3' decay
Decapping complex
18787426
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Gene silencing
piRNA pathway
18787426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
TFIIA
Motif
Other DBs
NCBI-GeneID:
18787426
NCBI-ProteinID:
XP_007220665
UniProt:
M5X7C7
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All DBs
Position
G2:complement(21381590..21387518)
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AA seq
499 aa
AA seq
DB search
MNSNRGRYPPGIGAGRGGGMNANPAFQSRPPHQQQYVQRNLLPNHHHQQYFQQQQHQQQQ
QQQQQWLRRGQLGGSTSADSAVDEVEKTVQSEAVDPSSHDWKARLNIPAPDTRFRTEDVT
ATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFC
IPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRL
YQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPSHRQ
ILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKL
QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD
LFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQE
LGTEIKQIPPHIDQAIYCR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaacagagggaggtaccctccggggatcggagctgggagaggtggtggcatg
aatgcaaaccctgcatttcagtctcgaccgccgcatcagcaacagtatgtacagaggaac
cttttgccgaaccatcatcaccagcagtactttcagcaacagcagcatcaacagcagcag
cagcaacaacaacagtggctcaggagaggtcagttgggtgggagtaccagtgctgattcg
gccgttgatgaggtcgagaagacagtgcagtcggaagctgtcgacccgagttcgcatgat
tggaaggcgaggttaaatattccagcacctgatactcgtttcagaacggaggatgtaact
gcaactaaagggaacgagtttgaggactattttctgaaacgtgagctgctgatgggaatt
tatgagaagggattcgaaagaccatcccctattcaggaagaaagtatcccaattgcttta
actggtagtgatattcttgctagagctaaaaatggaacggggaaaacagctgcattttgc
atccctgctttggagaaaattgatcaagataacaatgtaatacaagttgttattcttgtt
ccaactcgcgagttggctcttcaaacatcacaagtctgtaaggagctagggaagcatttg
caaattcaagttatggttacaaccggaggtaccagcttaaaggatgatatcatgcgttta
tatcaaccagttcacttacttgtcggaactcctggaagaattttagatcttgcaaagaaa
ggtgtttgcatcttgaaagattgttctatgcttgttatggatgaggccgataagcttttg
tccccggagtttcaaccttcagtagagcagctgatccgcttcttaccttcacatcgacaa
attttgatgttttcagctacatttcctgttactgtcaaggacttcaaggatagatatctg
caaaaaccttatgttatcaaccttatggatgagcttactctaaagggtattacacaattt
tacgcctttgtcgaggagagacagaaagtccactgcctaaacactcttttctccaagctt
caaataaatcagtcaatcatattctgtaattctgtgaatcgggtagagttgttggccaag
aaaattacagaacttggctattcttgtttttatatccatgcaaagatgctgcaagaccat
cgtaacagagtatttcatgacttccgtaatggtgcatgcagaaatcttgtttgtacagat
ctatttacaagaggaatagatattcaagcagtcaatgttgtcattaactttgattttcca
aagaactcagagacatatcttcacagggttggtcgatctggaaggtttggacaccttggt
ttagctgtgaatttgatcacctatgaagaccgcttcaacttgtatagaattgagcaagaa
cttgggaccgagataaagcaaattcctccccatatcgatcaggcaatttattgccggtga
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