Prunus persica (peach): 18787552
Help
Entry
18787552 CDS
T03092
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pper
Prunus persica (peach)
Pathway
pper00040
Pentose and glucuronate interconversions
pper01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18787552
Enzymes [BR:
pper01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
18787552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18787552
NCBI-ProteinID:
XP_007218319
UniProt:
M5XDD8
LinkDB
All DBs
Position
G2:25272586..25274956
Genome browser
AA seq
333 aa
AA seq
DB search
MASLPYADVDFSLRALSGRAEGFGRFAIGGLHGPLYFVTTLADDGPGSLREGCRKQEPLW
IVFEVSGTIHLSSYLSVSSYKTIDGRGQRVKLTGKGLRLKECEHIIVCNLEFQGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GNKKKTFEYYTEKAADREEAKSGFISSEGDLFLNGAQPCALTGFNQECMFHPSEFYPHWT
MEAASDSLKTILQILTGWQSIHRPAEQAQAVTV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctaccgtacgccgacgtggatttcagcttgagagcattgtccggtcgggcc
gagggcttcggccggttcgccatcggcggcctccacgggccgctctatttcgtcaccact
ttggcagatgatggtccaggctcacttcgtgaaggatgtcgaaaacaagaaccactgtgg
attgtctttgaggtttctggcaccattcacctttcgtcttacttgagtgtgtcatcttat
aagacaattgatggacgaggccagagagtaaagctcacaggaaagggccttagactgaag
gaatgtgaacacataattgtctgcaaccttgagtttcaaggcggtagaggacatgatgtt
gatggcattcagataaaaccgaattctaggcacatttggatagaccgatgcagccttcgt
gattatgatgatggactcatagatatcaccagacaaagtacagatataaccatctctaga
tgttacttcgcacaacatgacaagacaatgcttattggagcagacccctcccacgttggc
gatagatgcattcgggtgacaattcatcattgtttttttgatgggacaaggcaaagacaa
cctcgccttagatttgggaaagttcatctttacaacaattacactcgaaactggggtata
tatgctgtttgcgccagcgtagaatcccagatatactcccaatgcaacatatatgaagca
ggaaataagaaaaagacttttgaatattatacagaaaaggcagcagacagagaagaggca
aaatctggcttcataagttctgagggcgacctattcctgaacggagctcaaccatgcgca
ttaacagggttcaatcaagaatgcatgttccatccaagtgaattttatccacattggact
atggaagcagcctcagattctcttaaaactattctccaaattcttacaggttggcaatcc
attcataggccagcagagcaggcgcaggcggtaactgtatag
DBGET
integrated database retrieval system
