Prunus persica (peach): 18787995
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Entry
18787995 CDS
T03092
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18787995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18787995
03019 Messenger RNA biogenesis [BR:
pper03019
]
18787995
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18787995
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
18787995
U7-dependent histone pre-mRNA processing factors
18787995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Mur_ligase_C
Motif
Other DBs
NCBI-GeneID:
18787995
NCBI-ProteinID:
XP_007221460
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MASMAQPSPLKRREASASREDDKLIITPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYS
GMAALPYFDEIDPSIIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLT
DYVKVSKVSVEDMLFDEQDINASMDKIEVIDFHQTVEVEGIRFWCYTAGHVLGAAMFMVD
IAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQHHQPRHIREKRFTDVIHS
TVSQGGRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKRCLSVYETYTLS
MNDRIRNAKSNPFIFKYVSPLKSIENFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN
ACVIPGYVVEGTLAKTIINEPKEVTLMNGLSAPLNMQVHYISFSAHADSVQTTAFLEELR
PPNIILVHGEANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKAIGRLAEK
TPEVGESVSGLLVKKGFSYQIMASDDLHVFSQLCTANVTQRITIPFASGFTVIKHRLRQI
YESVESSVDEESGVPTLRVHDRVTVKQDTDKHISVHWSSDPISDMVSDSIVALILNINR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatggcacaaccctcacctctgaagcggcgtgaggcttctgcatcaagagaa
gatgataaactgatcataactcctttaggagctggtaatgaagtcggccgctcttgtgtg
tatatgtcctacaaagggaaaactgtgttgtttgattgtggaattcaccccgcatattcg
ggcatggctgctttgccgtactttgatgagattgatccttccataattgatgtcctcctc
attactcattttcacttggatcatgccgcttccctaccttactttcttgagaagaccaca
ttcaagggccgagtctttatgacttatgcaacaaaggccatctacaagttgcttttgacg
gattatgtgaaagtgagcaaagtttcagttgaagatatgttgtttgatgagcaggacata
aatgcctcaatggataaaattgaggttattgatttccatcaaacagtagaggttgagggc
attcgattttggtgctatactgccggtcatgtccttggtgctgctatgtttatggttgat
attgccggcgttagagtcctctacactggtgattattcacgtgaagaagaccggcatctc
cgtgctgctgagaccccacagttctcgcctgatatatgcattattgaatccacgtatggt
gtacagcaccatcagcctcggcacatcagagagaagcgattcactgatgttatccattca
accgtctctcaagggggtcgtgtcttaattcctgcttttgcactcggccgtgcccaagaa
cttctcctgatccttgatgagtattgggcaaaccatcctgagctccaaaatattcctatt
tattatgcttccccacttgcaaaaagatgtttatctgtatatgagacatacaccctttcc
atgaacgataggatccgcaatgcgaagtcaaatcccttcatattcaagtacgtatcacca
ctaaagagcattgaaaatttcaaagatgtaggcccgtcagtggtgatggcaagccctggt
ggtcttcagagtgggctgtcaaggcagctatttgatatgtggtgctctgataagaaaaat
gcatgcgttattccagggtatgtggttgaagggacactagctaaaacaatcatcaatgaa
ccgaaggaggtaactcttatgaatggactcagtgctcctctcaacatgcaggtccattac
atttcattctctgctcatgcagactctgttcagacaactgcatttttggaagagctgagg
cctcctaatataatccttgttcatggagaagctaatgagatggggaggctcaaacagaag
ctgatgacccagtttgctgatcgtaacaccaaaatcctcaccccaaagaattgtcagtct
gttgaaatgtattttaactcacagaaaatggcaaaagctattggaaggcttgccgagaag
acccctgaagttggtgaaagtgtcagcggtttactggtaaaaaaaggcttcagttatcaa
ataatggcttctgatgatcttcatgtcttctcacagctgtgcacagcaaatgtcactcaa
cgaattaccatcccatttgctagtggcttcactgtgattaaacaccggctaaggcaaata
tatgagagtgtagagtcttcagtggatgaggaatctggggtgccaacattgcgagtgcat
gatcgggtgacagtgaagcaggatacagataaacacatttcagtacattggtcatcagat
cctataagcgacatggtttcagactccattgtggctcttattttgaatatcaaccga
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