Prunus persica (peach): 18788275
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Entry
18788275 CDS
T03092
Name
(RefSeq) HBS1-like protein isoform X2
KO
K14416
elongation factor 1 alpha-like protein
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18788275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18788275
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18788275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
Zn_ribbon_RanBP
MMR_HSR1
Mg_chelatase
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
18788275
NCBI-ProteinID:
XP_007222919
UniProt:
M5XRE2
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All DBs
Position
G1:complement(38556801..38563382)
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AA seq
692 aa
AA seq
DB search
MPRKVNYGVDYDDDYDVYDDYDYDDDSVIKKNGKALESKRETERPEVWRCSICTYDNEGS
MSACDICGVLRNPVVKSNSDKKTAPFKFDVPSPDDLVSNGLWSSRTGSKASVNDLKSSKV
SSKVAKKNGAVSGQSSAEWSDSSSAIEQRSKQDRFDEGNQLENQTVSYHDGSSDIITLQA
NGRLSDSSSAPQPRSRHDSVDGSTNSSVIRGKQQSVTSGLKNLDLDARSGSSNNVNVRGS
HSQADYKPENWMLPDQAVDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKYEK
EAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSRKYHVVVLDSPGHKDFVPNMIS
GATQADAAILLIDASVGAFEAGVDGSKGQTKEHAQLIRSFGVDQIIVAVNKMDIVEYSKD
RFDLIKQRLGTFLRSCGFKDSLVSWIPLSAMENQNLVEAPSDVRFSSWYHGPYLLDAIDS
LQPPTREFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSGFKVLVMPSGELGTVRSLE
RDSQACVIARAGDNVAVTLQGIDGGHVMAGGVLCHPGFPVAVAKHLEMKVLVLDVTTPIL
IGSQLEFHIHHAKEAARVVKISSLLDPKTGKVARKAPRCLTAKQNAIVEVVLHQPVCVEE
FSNSRALGRAFLRALGSTIAVGIVTRIIEEQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaactacggagttgattatgatgatgactacgatgtctatgacgat
tatgattatgatgatgattctgtcataaaaaagaatggcaaagcacttgagtcaaagcgg
gaaactgaaaggcctgaggtctggcgttgttccatttgcacgtacgacaatgaggggagc
atgtctgcatgcgacatttgtggggttcttcgaaaccctgtggtgaaaagcaatagtgat
aagaaaacagctcctttcaagtttgatgttccatccccagatgatttggtttctaatgga
ttgtggtcctctagaacgggttcaaaagccagtgttaatgacttgaaatcttcaaaagtt
tcctcgaaggttgctaagaagaatggtgcagttagtggacaatcaagtgctgaatggtca
gatagctcctctgcaatagagcaaagaagtaaacaagatagatttgatgagggaaaccag
ttggagaatcagacagtcagctatcatgatggaagtagtgacataattactttacaagca
aatggtagattgtctgatagttcgtcggcaccgcagccaagaagcagacatgacagtgtg
gatgggagcacaaattcttctgtgattaggggcaagcagcagagtgttaccagtggcttg
aaaaatttggatttggatgctagatctggatcttctaataatgttaatgttagaggatct
cattcacaagcggactacaaacctgaaaattggatgctccctgaccaagctgtagataca
ctgactcaactaaatcttgcaatagttggccatgttgattctggaaaatcaacactctca
ggtagactgcttcatcttttgggaaggatatctaaaaaagaaatgcacaaatatgagaaa
gaggcgaagttacagggtaagggctctttcgcatatgcttgggcattggatgagagtgca
gaagaaagggaaagaggaataactatgacagtggccgttgcatattttgattccagaaaa
tatcatgttgttgtgcttgactcccctggccataaagattttgttccaaacatgatatct
ggggcaacacaagctgatgccgcgatacttctcatagatgcttcagttggcgcattcgaa
gctggtgtggatggtagcaagggacagacaaaggagcatgcacaacttatcagaagcttt
ggtgttgatcaaattatagttgccgtgaacaagatggatattgttgagtactccaaggat
cggtttgatttgattaaacagagacttggaacatttctccgttcctgtggcttcaaagat
tctttggtgtcttggattccactgagtgccatggaaaatcagaatttggtagaagctcct
tctgatgtccgtttttcttcttggtaccatggaccttacctgttggatgcaattgattcc
ctccaacctcccacaagagagttttcaaagccactgctcatgcctatatgtgatgtcatt
aaatcttcttcacaaggacaggtatctgcttgtggtaaattggaagcgggagctctccga
agtggattcaaggttctggttatgccttcgggagaattagggaccgtacgctctttagaa
cgtgactctcaggcttgtgtaattgcgagagctggagacaatgtggctgttactctgcaa
ggcatagatggaggtcatgtgatggcaggaggtgtgctctgtcaccctggtttcccagtt
gcagttgcaaaacatttggaaatgaaggtgctggttttggatgttacaaccccaatttta
attggctctcagttggaatttcacatacaccatgcaaaggaggctgccagagttgtaaaa
atatcgtcattacttgatcccaagactggcaaagtggcaagaaaggctcctcgctgtctt
actgcaaagcagaacgccattgtagaggttgttttgcaccagccagtttgtgtggaagag
ttctctaattccagagcccttgggagggcatttttaagggcattaggaagcactattgcc
gttggcattgtaacccggattatagaggagcagaaatag
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