Prunus persica (peach): 18788344
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Entry
18788344 CDS
T03092
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pper
Prunus persica (peach)
Pathway
pper03440
Homologous recombination
pper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18788344
03460 Fanconi anemia pathway
18788344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pper03032
]
18788344
03400 DNA repair and recombination proteins [BR:
pper03400
]
18788344
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
18788344
DNA replication proteins [BR:
pper03032
]
Eukaryotic type
DNA Topoisomerases
18788344
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
18788344
FA (Fanconi anemia) pathway
18788344
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
18788344
NCBI-ProteinID:
XP_007225297
UniProt:
M5XLX9
LinkDB
All DBs
Position
G1:14495771..14506488
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AA seq
866 aa
AA seq
DB search
MASNKVIMVAEKPSIALSIASVLSRGQMSTRKASTDVHEFEGMFLGFHVHFKVTSVIGHV
FSVDFPEKYQNWTTTDPLDLFQAPIQKTEANPKAHIRRHLSQEARGYGNLVLWLDCDREG
ENICFEVMDCIGHSNETRRRIYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEIDL
KVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWAVRPY
IMQKGYELQLEWERNKLFDYDVAVMFQKLVMEDGILEVTEIVEKQESKSRPSGLNTVNLL
KVASSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFRGTLGAQVNNPTWGSYV
QRLLADGYQKPRSGTDVGDHPPVTPLRSATEDMLGNDAWRLYEYICTHFMGTVSPDCKYV
RTKVEFSIGGEFFHCVGHRVLVKGFTSIMPWLAVTEKNLPQFTKGEKIEVSQVDLHEGMT
SPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVLAGRKLGPTALGITLIRGY
QCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFE
AQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGSIKLYKELTCPL
DNFELLIFSMPGPDGKSFPLCPYCYNSPPFEGIDTLFGAVKSGPSSQLGKGAGMPCFLCP
HPTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLCCNMCNFLVLLPEGAHQISTTRERC
PECDSTILEVDFNKKTTPLENGETLYTGCILCDELLHSLVEMKYGKSFFKRLGGRGRGRG
SRRGGYRGRGRGTGKKVDPKMSFRDF
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacaaagttatcatggtcgcagagaagcctagcatagctctttctatagcc
tctgttctctcccgtggtcaaatgtctacaagaaaggctagtacggatgtccatgaattt
gagggaatgtttcttgggtttcatgtgcattttaaagtaacatcggttattgggcatgtt
ttcagtgtagattttcctgaaaaatatcaaaattggacaaccactgatcctcttgatctt
tttcaagccccaattcaaaagacagaagcaaatccaaaggctcatattcgcaggcatctg
agccaagaagctcgtggttatggtaacttggttttatggttggattgtgatcgtgaaggg
gaaaatatttgttttgaagttatggattgtattggccattcaaatgagactagaagaagg
atttatcgtgctcggttttcctctgttactgagaaagacattttaaaggccatggacaac
cttgttgaacctaataaggatgaggcattggcagtggatgctcggcaagagatagatttg
aaagttggagttgcatttacacggtttcaaacaagcttttttcaggggaaatacggaaat
cttgattccagagttatctcctacgggccatgtcagactcccacccttggtttttgtgta
caacgctatctgcagataaatacattcaaaccggaaaagttttgggctgtacgcccttac
ataatgcaaaagggctatgaacttcagctagaatgggaacgtaacaagttgtttgactac
gatgttgctgtaatgtttcaaaagttggtaatggaagatggaattctagaagtgactgag
atagtagaaaagcaagaaagcaaaagtcgtccttctggtcttaatacagtcaatcttctg
aaggttgcttcaagtgcactaggttttggaccacagatggccatgcaagttgctgaacgc
ttgtatactcaaggtttcatcagctatccacgtaccgagagcacagcttatccttcttct
tttgactttagaggcacacttggtgcgcaagtaaataacccaacatggggtagttatgtt
cagaggctgcttgctgatggttatcaaaagccacgatccgggacagatgtaggtgaccat
cctcctgttactccattgaggtctgcaactgaggacatgctaggaaatgatgcttggaga
ctatatgagtacatttgtacacacttcatggggactgtatctcctgactgcaaatatgta
agaacaaaggtagaattttcaatcggtggagaattcttccattgtgtagggcatcgtgtt
ttggtgaaaggatttacttctatcatgccatggttggcagtaactgagaaaaatcttcct
cagtttacaaaaggggagaaaatagaagtttcacaagtggaccttcatgaggggatgacg
tcacctccagactatctaagcgagagtgagctaatttcccttatggagaaaaatggaatt
ggcacagatgcgtcaatatctgttcatattaacaacatatgtgagcgcaattatgtgcag
gtactagctggcaggaagctgggtccaactgccttaggtattactctaataagaggctat
caatgcatcgatccagatctctgtttgccagatattcgcagtttcatcgagcagcaaatt
actcttgttgctaaggggcaagcagatcattttcgtgttgtccagcatgtcctacaacaa
ttcaggcaaaaatacagttactttgtcaagcagattgaaaacatggatgcattatttgaa
gcacaattctccccccttgctgactcaggacgagttctcagtaaatgtggcaaatgtcta
cggtacatgaagcacatttccacccaaccttctcgtttgtattgtaatacatgcgaggag
gtttattatcttcctcaaaagggtagcattaagctgtacaaggaacttacttgtcctctt
gacaactttgagctactaatcttctccatgcctggcccggatggcaagtcatttcctctc
tgcccatactgctacaatagtcctccttttgaaggtatcgacacgctctttggtgctgta
aaatctggtccatcaagccagctgggaaagggagctgggatgccatgcttcctatgccca
caccccacatgtcgacattctttgattgcccaaggagtctgtgcttgccctgaatgtagt
ggaacacttgttctagaccctgtgagtgctcccaaatggcggctctgttgcaatatgtgc
aatttccttgtcttgctccccgaaggagctcaccagatttccactactcgagagcggtgc
cctgagtgtgactccacaatcttagaagtggacttcaataagaagacaacacccttggag
aatggagagacgttgtataccggttgcattctttgtgacgaattgctccattcgctagtg
gagatgaaatatggcaaatcatttttcaagcgcttgggtggaagaggaaggggtagagga
tcaaggagaggtggatatagggggagagggcggggtaccgggaagaaggtggatcctaaa
atgagcttccgtgatttctga
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