Prunus persica (peach): 18788346
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Entry
18788346 CDS
T03092
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
pper
Prunus persica (peach)
Pathway
pper03030
DNA replication
pper03410
Base excision repair
pper03420
Nucleotide excision repair
pper03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18788346
03410 Base excision repair
18788346
03420 Nucleotide excision repair
18788346
03430 Mismatch repair
18788346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pper03032
]
18788346
03036 Chromosome and associated proteins [BR:
pper03036
]
18788346
03400 DNA repair and recombination proteins [BR:
pper03400
]
18788346
DNA replication proteins [BR:
pper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
18788346
DNA Replication Termination Factors
ELG1-RFC complex
18788346
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
18788346
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
18788346
Check point factors
HRAD17(Rad24)-RFC complex
18788346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_16
AAA_22
AAA_assoc_2
AAA_11
AAA_30
AAA_5
AAA_24
AAA_14
DUF815
RuvB_N
DNAX_ATPase_lid
AAA_7
AAA_19
ATPase_2
ResIII
bpMoxR
AAA_2
nSTAND3
SLFN-g3_helicase
TniB
AAA_3
AAA_25
AAA_28
MCM
Mg_chelatase
TIP49
Motif
Other DBs
NCBI-GeneID:
18788346
NCBI-ProteinID:
XP_007223184
UniProt:
M5XS58
LinkDB
All DBs
Position
G1:complement(40996506..41000559)
Genome browser
AA seq
369 aa
AA seq
DB search
MAEVITVMDIDDDNNPSPKPNNNNNMGKNVVVAAAPSQGKATPWVEKYRPQSLADVAAHR
DIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID
VVRQQIQDFASTQSFSFGGDSAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFSL
ICNHVNKIIPALQSRCTRFRFAPLEEFHVSERLKHVIETEGLDVSESGLAAVVRLSNGDM
RKALNILQSTHMASQQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAESFKRISDMKTT
KGLALIDIVREVTMFVFKIKMPPVVRVQLINDLADIEYRLTFGCNDRLQLGSLVASFTTA
RSALVSAAK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtgatcactgtcatggacatcgacgacgataacaacccatctccaaaaccc
aacaacaacaacaacatgggcaaaaacgtcgttgtcgccgccgccccttcccagggcaaa
gctacgccgtgggtcgagaagtaccgtcctcagtcactcgcagatgtcgccgctcaccgc
gacattgtcgacaccattgataggctcactagtgagaacagattgccacacctcttgttg
tacggccctcctggcactggcaaaacttcaaccattcttgctgtggcacgcaagctctat
ggagcacaataccacaatatgattctggagttgaatgcatcggatgataggggtattgat
gttgtgcgacaacagatccaagattttgctagcacacagagtttctcatttgggggtgac
agtgcaaagtcatctgtaaaattggtcttgctggatgaggctgacgctatgacaaaggat
gctcaatttgctttgcgaagagtgattgagaaatacacaaggaacactaggttttcacta
atctgtaatcatgtcaacaagattattccagcattacaatcaagatgtactcgttttcga
tttgctccactggaggagtttcatgtttcagagagactcaaacatgttatagaaactgaa
gggcttgatgtgtctgagagtggcttggcggcagttgtgcggcttagcaatggtgacatg
agaaaggctctgaacattttgcagtcaactcatatggcttcacagcagcagataacagaa
gaagcagtatatctttgcacaggaaatccattgcccaaagacattgagcaaatatcctac
tggcttttgaatgaatcatttgctgagagtttcaaacgaatatctgatatgaaaacaact
aaagggttggctttgatagatattgtaagagaagtgaccatgttcgtttttaagattaag
atgccaccagttgttcgagttcagttgattaatgatttagctgacatagagtacaggttg
acctttgggtgcaatgataggttgcaacttggatcattggtagcttcttttacgacagct
cgatctgcacttgtttctgctgcgaagtag
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integrated database retrieval system
