Prunus persica (peach): 18788398
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Entry
18788398 CDS
T03092
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-3 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pper
Prunus persica (peach)
Pathway
pper03022
Basal transcription factors
pper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18788398
09124 Replication and repair
03420 Nucleotide excision repair
18788398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18788398
03400 DNA repair and recombination proteins [BR:
pper03400
]
18788398
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
18788398
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
18788398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
18788398
NCBI-ProteinID:
XP_020409683
LinkDB
All DBs
Position
G1:47384716..47392550
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AA seq
604 aa
AA seq
DB search
MSCRQVVKRASYKSKIKDPGTPGVLTMTENKFVFRPNDPSSAAKLDVEFKHITGHKNTKE
GTDKPPWLNLSDKDRSYIFEFGSFHDLHVCRDFVGNALAKSGEAAKASSAAKPTSAAKTT
SEKSGVTLPDEQLSTAEMQLRMKLLQEDSELQKLHMQFVISGVLTESEFWATRKKLLDGD
SRTKSKQRVGFRSSMILDTKPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSK
MTEKDFWTKYFRAEYLHSTRNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTL
DMEADQGDDYTHLPDHGIFRDGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLE
DPRTVAEALMQSRRESDESAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQ
QVNALKTLDDSRTGTEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGL
TQNISSTKYQLGKNPQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKV
GRLKDAMSQIYRQLEEIKQSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETP
NGNS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtaggcaagtggtgaagcgtgcgagttacaaatctaaaatcaaagatcctggg
actcctggcgttttaactatgacagagaacaagtttgtgttcaggccaaacgacccctcg
tccgctgcgaagctcgatgtggagtttaaacacattacaggtcacaaaaacactaaggag
ggaacagataaaccaccttggcttaatctcagtgacaaggatagaagttacatttttgag
tttggaagttttcacgatcttcatgtatgccgagattttgtaggcaatgccctcgctaag
tctggagaggcagcaaaagcttcttctgctgcaaaacctacttctgctgcaaaaacgact
tctgagaaatctggtgtcacattgcctgatgaacaactcagtactgcagaaatgcagctc
cgtatgaagctattacaagaagacagtgaattgcagaaacttcatatgcaatttgtaatc
agtggtgtcttgacggaatctgagttctgggcaactaggaagaagttgcttgatggagat
agccgtacaaagtcaaagcaacgggttggtttcagaagttcaatgatattggacaccaaa
cctatgactgatggccggatgaacaaggttacttttaatttgactccagagattaaatat
cagatttttgccctgaaaccagctgttcaccaggcatttcttactctggttcccagtaag
atgacagaaaaagacttctggacaaaatatttccgagctgaatacctccacagtacaagg
aatgctgttgcagctgcagcagaagctgccgaggatgaggaactggcaatttttttgaag
gaggatgctatattggcaagtgaagctcgtcggaagattcgacgggttgatccaacttta
gatatggaagctgaccaaggagatgattatacccatcttccagatcatgggatatttcgt
gatggaagcaaggacgtcacggaattgcagaacgagctatacaggaggactttatcacaa
gaccttaatcgacaaggcgctgttgttcttcaaggaagaacagtcgatgttgatttagaa
gatccaagaactgttgcagaggcacttatgcagtcaagacgggagtctgatgagagtgct
gaacaggagagacttgataggattactcggatgacggagatagaggaccttcaagaacat
cacgatcatcctgttgctcaattatgtattaaggatcctcgagactactttgacacgcaa
caagttaatgcacttaaaactttggatgactcacgtactggaactgaacagaaaaaatgc
agcctgactactgaggaagcatatggctccttgagggaggctatatctaaaattaagagc
attggattgaaaaattccacagttgcaccagaaattgctattacggttcttaatggactg
acccagaatatttcaagtacgaagtatcaacttgggaagaatcctcaggacagtgtccta
gacagtttgccaaacaaaacgaaagaggaacttctgcaccactggatatccattcaagaa
ttactgaggcacttttggtcttcatatccaattacgacaacgtatctatctactaaggta
ggcagactgaaggatgccatgtcacaaatttatcgacagttagaggagataaagcaatcg
gacttccggcaccaggtttccctcctcgttcgtccaatgcatcaggctcttgatgcggct
tttcaacattttgatgcggacttacagaaaagagcagcaaggagtggaggagagacgcca
aatggaaactcgtag
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