Prunus persica (peach): 18788875
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Entry
18788875 CDS
T03092
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
pper03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18788875
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
18788875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18788875
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
18788875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
18788875
NCBI-ProteinID:
XP_020426099
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All DBs
Position
G1:complement(25413630..25418200)
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AA seq
660 aa
AA seq
DB search
MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQ
MHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ
GQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNVGGDSSDIT
GKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGE
LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLF
NGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGDTGGR
NFGRGGWGRGGQGVANRGPGGGGPMRGRGGAMGAKNMAGNPAGVGTGANGGYGQGLAGPG
FGGPVGGMMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHV
NPAFFGRGMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASE
YGYGEANHEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKE
EKDSYRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggctgaagagcaaatagattatgaagatgaggaatatggaggggctcag
aagcttcagtatcagggaagtggagccatctctgcgcttgcagatgaagaacccatggta
gaagatgatgagtatgatgatctctataatgatgttaatgttagagagggtttcttgcag
atgcaccggtctgaggcaccactcccacctggtggtgttggcaatggaggtctccaagca
cagaaaactgatgttactgaaacaagagttcaagctggtgtctctcaggaatcgaaaatt
cctggggtttcagttcaagggaagtattctagtgctgtggcccagtttccagaacaacag
ggtcagccaccagtggctaaggagccagaactgggatccacaggttatgtgggtggagct
tctggatctcaaaaggggagggctatggagatgagtcatgatactcaagtcagacatatg
gggtttcaggggtcgacaactatgcccccaaatgtcggtggtgattcttctgacattact
gggaaaactgctctcgagtctgttccgtctatgaattctggcactgctggtcctacagga
gttacacagatgccgactaatcaaatcagtatcaaggtaaatgctaatcgtccaatgttt
aatgaaaaccaaatccggccaccagttgaaaatggttcaaccatgctgtttgtgggagaa
ctacattggtggacaactgatgctgagcttgaaagtgttttatctcagtatgggagggtc
aaggaaattaagttttttgatgagagagccagtggtaaatccaaaggatattgtcaggtt
gagtttcatgatccagctgctgccactgcatgcaaagagggaatggatggttatcttttc
aatgggagagcttgtgttgtggcttttgcttctccacagactttgaagcagatgggagct
tcttatttaagcaaatcccaaggccagactcagtctcagcaaccaggaagaaggcccatg
aacgagggtgttggaaggggaggaggtgtgaactatcaaactggagacactggagggagg
aattttggaaggggtggatggggacgaggtggacagggagtagccaacagaggtcctgga
ggtggaggaccaatgagaggaagaggaggggccatgggcgcaaagaacatggctgggaac
cctgctggtgttggaactggtgctaatggaggctatggacagggccttgcaggtcctggg
tttggaggtcctgtaggaggtatgatgaatccacagggtatgatgggtgctggatttgat
ccaacatatatgggccgaggaggcggttatggaggatttccaggtcctgcttttcctgga
atgctttcttcatttcctgctgttaatacaatgggacttgctggggtggctcctcatgta
aacccagctttctttggcaggggaatggcaactaatggaatgggaatgatgggttcttct
ggaatggatgggcatcatgcagggatgtggaatgacccaagcatgggtgggtggggagga
gacgaacatggtcgaagaactagggagtcaagttatggtggtgatgatggtgcttctgag
tatgggtatggagaggcaaatcatgaaaaaggaggaaggtcaaatgctccctcgagggaa
agagaacggggatctgagcgtgactggtcaggaaactctgagaggaggcatcgtgatgag
agggaacaagactgggacaggtctgaaagaggggagcacagggagcatcggtacaaagaa
gaaaaagatagttaccgagaccatcgacagagagagcgtgatgtgggttatgaggatgac
tgggacagaggtcagtcttcttcaagacctcggagccggtccaaagcaatgccggaagat
gatcatcggtctcgatcaagggatgttgattacgggaagaggagacggttgccatctgag
tga
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