Prunus persica (peach): 18789207
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Entry
18789207 CDS
T03092
Name
(RefSeq) uncharacterized protein LOC18789207 isoform X1
KO
K06100
symplekin
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18789207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18789207
03019 Messenger RNA biogenesis [BR:
pper03019
]
18789207
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18789207
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
18789207
U7-dependent histone pre-mRNA processing factors
18789207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
18789207
NCBI-ProteinID:
XP_020416025
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All DBs
Position
G1:44233264..44254199
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AA seq
1346 aa
AA seq
DB search
MAGAAPSDRALSLLATVNNHGDLAVKLSSLKQAKDILLSIHPSVAAELFPYLIELQSSPE
TLVRLSLIEVVEEIGLKAMEESSVLMSILLEFLKDSDSIVARQSIVSGTNLFVSVLEEMT
LQFHRRGKVEIWLEELWSWMAKFKDAVFTIALEPGSVGTKLLALKFLETYVLLFTSDANG
SEKPVAEDTTASKKAFNVSWLVGGHTILDPYILMSEANRTVGILLNLLRSAGSLPGCVTI
AIVNCLAAIARKRLVHYNTILSALLDFDPNFEIVKGHHAASIQYSLRTAFLGFLRCTNPV
IVESRDRLLRALRAMNAGDAADQVIRQVEKMLRNAERVSRDARLGKDDQQSSQLPVSGDL
LKRRLTPLDTEEASNNHEMPSKRIRYGPDSYSTLPVQMNASGRDTTSVNGVSSDLPVLDG
ELTPVEQMIAVIGALLGEGERGGESLEILISNIHPDLLADIVITNMRHLPKIPPPLTRLG
NFPAPRQIGSLSSSAQVVAGSPTSSVQSPVLTEQVPFSSATVTSLTVSDASNVNSLPTDS
KRDPRRLHFQDPRRLDPRSAAASAGLASTPMEDTTAMQSDLDGSMSLNKLNLLPNVTTVE
TPLATPMLQTESDEKTFDSQLVSGSGQLTPKEEVLDGPVEIDPASKLGLSSDLTDSPVQT
VDEDLIATKLSDIEGKDEDEDLDTSSFLESDQHSPVLSNTSASEDTYQDFPQLPIYVELT
QEQERSVGKLAIERIIESYKYLHGEDYSQMRLALLARLVAQIDADDEIVVLLHKHILVDY
QQQKGHELVLHVLYHLHALTISDSVESCSFATAVYEKFLLEVAKSLLESFPASDKSFSRL
LGEVPILPDSTLKLLDDLCNSDVIDKHGKDIRDVERVTQGLGAVWSLILGRPHYRQSCLD
ITLKCAVHSQDEIRAKAIRLVANKLYQLSYISEIIEKFATNMLLSAVEQSPSGTEHAQSG
PTGQRAERMLESQEPSISDFEVSESGNSENDSSRKDQALSTMSFPEVQRLISLFFALCIK
KPILIQLVFNTYGHAPKAVKQAFHRHIPILIRALGSSYSELLNIISDPPQGSENLLMLVL
QILTQETSPSSDLIATVKHLYETKLKDVTILIPMLSALSKNEVLPIFPRLVALPLEKFQT
ALAHILQGSAHTGPALTPAEVLVSIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLA
KALNQMVDQTPLPLLFMRTVIQAIDAFPSLVDFVMEILSKLVSKQVWRMPKLWVGFLKCA
SQTQPHSFRVLLQLPPPQLESALNKYANLRGPIAAYASQPSVKASLPRPTLAILGLANET
HLQQPHLPSSFHPTDTNSSVHGATPT
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcagctcccagcgaccgagctctttctcttctcgccacggtcaacaatcat
ggcgatttggccgtcaagctctcgtctttaaagcaggccaaagatatcttattatccatc
catccatctgtggctgccgagctcttcccctacctgatcgagctccagtcctcccccgaa
acccttgtccggttatctctcatcgaggtcgttgaggagattggattgaaagcaatggag
gaatcttctgtactaatgtctatcttattggaatttttgaaggacagtgactctattgtt
gcacggcaatccatagttagtggaacaaatttatttgttagtgtcttggaggagatgaca
ttgcagtttcatcggcgaggtaaagtcgagatatggcttgaagaactttggtcgtggatg
gccaagtttaaggatgcggttttcactattgcattagagcctggttctgtagggacgaag
ttgcttgcattgaaattcttggaaacatatgttttgctattcacttctgacgccaatggc
tctgaaaaacctgttgcagaagatacaacagcaagtaaaaaggcttttaatgtttcgtgg
ctggttggtggacacactattcttgacccatatatactcatgtcagaagcaaataggact
gttggcattctattaaatttgttgcggtcggctggtagtctccctggttgcgtgacaatt
gccattgtaaattgtcttgcagccatagcaaggaagaggctggttcattacaataccatt
ctttctgcactattagattttgatccaaactttgagatagtgaaaggacaccatgctgct
agcatccagtattctttaagaactgcattcttgggattccttaggtgcactaacccagtc
attgtagagtcaagagatagactgcttagagctctacgagctatgaatgctggtgatgcg
gctgatcaagtgatccgtcaagttgaaaaaatgttaagaaatgctgagcgtgtttcacgt
gatgctcggttgggcaaggatgatcaacaatcaagccagttgcctgtttcgggggacctg
ctaaagagaagacttactcctctggatactgaggaggcatctaataatcacgagatgcct
tccaagcgaattcgttatggtcctgactcctattcaactttgccagttcaaatgaatgct
tctgggcgggacaccacttctgtcaatggagtgtcctctgaccttcctgtattagatggt
gagttgacccctgtggagcaaatgattgctgtaatcggtgctttgcttggtgagggagaa
agaggtggtgaatcacttgaaattcttatttcaaatatccatcccgatctgttggccgat
attgttataactaatatgaggcacttgcctaagatacccccacccttgacaaggctcggg
aattttccagctccacggcagataggttctttaagtagttcggcacaagttgttgcaggc
tccccaacatcttctgtgcagtctccagttctcaccgaacaagtgcctttctcttcagca
actgtaaccagtttaacagtttctgatgcgtccaatgtgaatagtcttcccactgattcc
aagcgagatccgcgaaggttgcattttcaggatcctcgtcgcttggatccgcgaagtgca
gcagcttctgctggactggcatccacacccatggaggatactactgctatgcagtctgac
ttggatggctcaatgtctttaaataagcttaatctgctccccaatgtgaccactgtcgaa
actcctttagcaactcccatgctccaaacggaaagtgatgaaaagacttttgatagccaa
ttggtttctggaagtggccaactaactcctaaggaggaggttctggatggacctgttgaa
attgaccctgcttcgaagctcggtttatcttccgatctcacagattctcccgtgcaaaca
gttgatgaggacctgattgcaacgaagctttcagatattgaagggaaagatgaggatgag
gaccttgatacctcatcctttttagaatctgatcagcattctccagttctttcaaacacg
tctgcatccgaagatacttatcaagattttcctcagcttcccatttatgttgagctgacc
caagaacaggaacgaagcgtgggaaaattagctattgaacgaattattgagtcatacaag
tatttgcatggtgaagattacagtcagatgcgcttggcattacttgctcgattggttgct
cagattgatgcggatgatgaaattgttgtactgctgcataagcatatccttgtggattac
caacagcaaaagggccatgagctagtattgcatgtcttgtaccatctgcatgctttgacg
atatctgattcagttgaaagctgttcatttgctactgctgtatatgagaagttcctcttg
gaagtggctaagtctttgctggagtcctttccagcctcagacaagtcgtttagtagactt
cttggtgaagttccaattctgcccgactcaactttgaaactgttagatgatctatgcaat
tctgatgttattgataaacatggaaaagatattcgtgacgttgagcgtgtcactcagggc
cttggtgctgtttggagtttaattttggggaggccacattatcgacaaagctgcttagac
atcactttgaagtgtgctgttcattcacaagatgagatcagagccaaagctatccggctg
gtggcaaacaaactttaccagttgagttacatatcagaaattattgagaaatttgctaca
aatatgttgctgtctgctgttgaacaatctccatctggtacagagcatgcacaatcgggg
cccactgggcaaagagcagaacggatgctcgaaagtcaagaaccatctattagtgatttt
gaagtttcggagtcaggaaattctgaaaatgattcctcaagaaaggaccaagcactatca
accatgtcatttcctgaagttcaacgactcatttctttgttttttgccttatgtataaag
aaacctattcttattcaacttgtatttaatacttatggacatgccccgaaagctgtaaag
caggcttttcatcgccatattcccattcttataagggccttagggtcatcttattccgaa
ttgttaaatattatatctgatccaccacaaggaagtgagaatcttttgatgctggttctg
caaatattgacccaggagacttcgccttcgtctgatctgatagccaccgttaagcatttg
tatgaaactaaattaaaggatgtcacaattctcattccaatgctgtctgcactttcaaaa
aatgaggttttacctatattccctcggcttgtcgctcttccattagaaaaattccagaca
gcacttgctcacatactacagggctcagctcatacaggtccagctttaacgcctgcggaa
gttttggtttccatccatggaattgttcccgagaaagatggtctcgcacttaagaagata
acagatgcttgctcagcttgtttcgagcaacgcacagttttcacacagcaagtcttggca
aaggccctgaatcagatggttgatcaaactcctcttcctcttctctttatgcggacagtt
attcaggcaattgatgcttttccttcactggttgattttgtaatggaaatactttccaaa
cttgtgagtaaacaggtgtggagaatgccaaaactgtgggttggcttcttgaaatgtgcg
tctcagacacagccacattctttccgtgtattgttacagttaccacccccacaacttgaa
agtgctttgaacaaatatgcgaacctcagaggtcccattgctgcttatgctagccagcct
agtgtaaaagcttcactccctagaccgacacttgcaattcttggtcttgcaaatgaaaca
catttacagcaaccgcatttgccatcatcatttcaccctacagacacgaattcatcagtt
catggagcaactccgacgtga
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