Prunus persica (peach): 18789475
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Entry
18789475 CDS
T03092
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18789475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18789475
03012 Translation factors [BR:
pper03012
]
18789475
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18789475
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
18789475
Translation factors [BR:
pper03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
18789475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
NACHT
nSTAND3
AAA_19
ATPase
Dicer_dimer
T2SSE
PhoH
AAA_11
Motif
Other DBs
NCBI-GeneID:
18789475
NCBI-ProteinID:
XP_007225431
LinkDB
All DBs
Position
G1:30675476..30683829
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AA seq
1214 aa
AA seq
DB search
MPSPSLAFLFLPSPSLQFAAAPSHPKPIAFKPSPSPSPSLLAMKDRPPSSYGAVYVPPHH
RLRSVITSPNYNSAASIGSKLRENQSAALNRRSTNGTLTYYQTQQQEQLQKPKLQHNSAY
DDGVSEEGSDREVELPSRPTQGASPSDNIDDWKRKLTMLLRDKEKQELVSREKKDRRDFE
KIAALASRMGLYSHLYAKVAVFSKVPLPNYRFDLDDRRPQREVTLPLGLLRRVEGYLGEF
LSQKSRTREGLPDASFSRSNSSGSIATDEGLFEQPESLASSKVVMEKILWRRSLQLRDKQ
QAWQESPEGRKMLELRRSLPAYKEKDALLTAISRNQVVIISGETGCGKTTQIPQFILESE
IEAVRGAVCSIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCT
TGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLDS
ELFSSYFGRAQIIHVPGFTYPVRTHFLEDVLEITGCRLTPYNQIDDYGQEKMWKMSKQAP
RKRKSQIASVVEDALKAADFNGYGPQTQESLACWNPDCIGFNLIEYLLCNICESERPGAI
LVFMTGWDDINSLKEKLHANPLLGDSSRVLLLACHGSMASSEQRLIFDEPEDGVRKIVLA
TNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGE
CYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLNLGSISEFLSRALQSPELLAVQNA
IEYLKIIGALDENENLTVLGRYLTMLPVEPKLGKMLLVGAILNCLDPVLTIVSGLSVRDP
FLTPFDKKDLAEAAKSQFSRDYSDHLALVRAYEGWKVAERDFAGYDYCWKNFLSAQSMKA
IDSLRKEFFSLLRDTDLVDANTTTHNAWSYDEHLIRAVICYGLYPGICSVVHNEKSFLLK
TMEDGQVLLYSNSVNAREPKIPYPWLVFNEKIKVNSVFLRDSTAVSDSMLLLFGGSFSKG
TLDGHLTMLGGYLEFFMKPAIAELYLCLKGELDELIQTKLLNPRMDTHAFHELLSAVRLL
LSEDQGEGRFVFGRQVLTSSKPSVLAAQPASTLVSRTDSGPGGDNSKSQLQTLLTRAGYA
APTYKTKQLKNSQFRATVEFNGMEIMGQPCNNKKSAEKDAAAEAIQWLVSGTQMGHGYIN
HMSMMLKKSKKDHN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaccatctctagcttttctctttcttccatctccttctctccaattcgccgcc
gcaccttcacatcccaaacccattgccttcaaaccctcaccttcaccctctccctcactc
ctcgcgatgaaggaccggcctccttcttcgtacggcgccgtttacgttcctccgcaccat
cgcctccggtcagtcatcactagccctaattacaactctgctgcttcaattggctccaag
ctccgtgagaaccagagtgctgctctgaaccgtcggagcaccaatggtactctgacttac
taccagactcagcagcaggagcagctgcagaagcccaagttgcagcacaattctgcttac
gacgacggcgtttctgaggaagggtccgatcgcgaagttgagttgccatcgcgtccgact
cagggtgcttccccgtctgataacattgatgattggaaacggaaactaacaatgctgtta
cgtgacaaggagaagcaagagttggtttcaagggagaaaaaagatagacgtgattttgag
aaaatagctgctttggcaagcagaatggggctttatagccatctgtatgcaaaagttgct
gtctttagtaaggtcccactgccaaactacagatttgacctcgatgacaggcgccctcag
agagaggtgaccttgccccttgggttgctgaggagagtcgagggctatcttggagaattt
ctttctcagaagtctaggacgagggaagggcttccagatgcttccttttctagatcaaac
agtagtggcagcattgctactgatgaagggctttttgagcaaccagaatcattggcgtct
agtaaggttgtaatggaaaagattctttggcggagaagcttgcagctgcgtgataagcaa
caagcttggcaggaatctcctgaaggtagaaaaatgctggaacttcggagaagtctccct
gcctataaagagaaggatgcattgttgactgcaatttcacggaatcaggttgttatcata
tcaggtgaaactggctgtggcaagaccactcaaattccacaattcattctagaatctgag
atagaagctgttcgtggagctgtttgtagtattatatgtacacagcctagacgaatatct
gctatgtctgtttctgaaagagttgcttcagagagaggggagaaattgggtgaatcagtt
gggtataaggttcggttagagggtatgaaagggagggacactcgccttctcttttgcacc
actggcattttgttgagaagattactggttgatagaaatttgaaaggtgtaactcatgtg
attgttgatgaaattcatgaacgtggaatgaatgaagattttctgcttattgttctcaag
gatctcctacctcgtcgaccagaactgaggctgattctgatgagcgcaaccctagattct
gagcttttctcatcctactttggtagggctcagataattcatgttccaggttttacatat
ccagttcgaactcattttctggaggatgttctggaaattacgggctgcagattaacgcca
tacaatcagattgatgattatggtcaagaaaagatgtggaaaatgagcaaacaggcacca
agaaagaggaaaagccaaattgcatctgttgttgaggatgcacttaaagcagccgatttt
aatgggtatggtccccagactcaggaatctctagcatgttggaatcctgattgtatcggt
tttaatctcatagagtatcttttgtgcaatatctgtgagagtgaaaggcctggtgctatt
ctagtttttatgactggatgggatgacatcaactctctgaaggaaaagttacatgccaat
cctctcttaggtgattcaagccgagtcttgttgctagcatgccatggttctatggcaagt
tctgagcagaggttaatatttgatgagcctgaggatggagtgaggaaaatagtgctggct
actaatattgctgagacaagcatcacaattaatgatgttgtttttgttcttgattgtgga
aaggcaaaagagacttcatatgacgcactgaataatactccttgtttgcttccttcctgg
atttccaaggtgtctgctcaacaaagaagaggaagagctggacgtgtccagcctggggaa
tgttatcatctctatcctagatgtgtatatgacgcatttgcagagtatcaattgccagaa
attttgagaacgcctctgcagtctctctgtctgcaaataaaaagtttaaacctcggaagc
atttctgagttcttatctagggctctgcagtcaccagagttactcgcggtgcaaaatgcc
atagagtatttaaagatcattggggccttagatgagaacgagaatctgactgttttagga
cgctatctaactatgcttcctgtggagccaaaacttggaaagatgctcttggtaggcgcc
atcttaaactgcctggatccagttttaactattgtttctggccttagtgtcagagatcct
ttcctaacaccatttgacaagaaagatcttgctgaggctgcaaagtcacagttttcacga
gattatagtgatcaccttgctcttgtgcgggcctatgagggctggaaggttgctgaaaga
gactttgctggatatgactactgctggaagaactttctttcagcacaatcgatgaaagct
attgattctcttaggaaggaattcttctctttgctcagagatactgatcttgttgatgcc
aacaccaccacccataatgcatggagttatgacgagcatctcatccgtgcagttatttgc
tatggcctgtatcctggaatttgctctgttgtgcacaatgagaagtcatttctgctgaaa
actatggaggacggtcaggtgctgctatactcgaactctgtcaatgctcgggaacctaaa
attccatatccatggctggttttcaatgagaagataaaagtgaactctgttttcctacgg
gattcaacagctgtgtctgactcaatgctcctcctatttggtggaagcttttcaaaaggg
actttagatggacacttgacaatgctgggaggatatctggagttcttcatgaaacctgct
atagcagaactgtatctatgtttaaaaggggaacttgatgagttaattcaaaccaaacta
ctgaaccccaggatggacacacacgcatttcatgaactcctttctgcagtgcggttgctg
ctctcagaggatcaaggagagggtagatttgtatttggccgtcaggtccttacatcctca
aagccatctgtgttggcagcacagccagcctcaaccttggtttcaagaactgacagtgga
cctgggggtgataattctaagagtcagctccagacattgctcacaagagctggatatgct
gcacccacctacaaaactaagcaactgaagaacagccagttccgagctacggtagagttt
aacggaatggaaattatgggccagccttgtaataacaagaagagtgcagaaaaagatgca
gcagctgaggccatccagtggctggtgagtggaacacaaatgggccacggttacatcaat
cacatgtcaatgatgttgaagaaaagcaaaaaggaccataattaa
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