Prunus persica (peach): 18790321
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Entry
18790321 CDS
T03092
Name
(RefSeq) polyadenylate-binding protein 2
KO
K13126
polyadenylate-binding protein
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18790321
09123 Folding, sorting and degradation
03018 RNA degradation
18790321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18790321
03041 Spliceosome [BR:
pper03041
]
18790321
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
18790321
mRNA cycle factors
Stress granule specific factors
18790321
Spliceosome [BR:
pper03041
]
Complex C
Other components
Complex C specific factors
18790321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_occluded
RRM_3
RRM_7
RRM_Nup35
RRM_10
RRM_fung
SET_assoc
RBD_DGKtheta
BRAP2
Motif
Other DBs
NCBI-GeneID:
18790321
NCBI-ProteinID:
XP_007226962
UniProt:
M5XRJ2
LinkDB
All DBs
Position
G1:37005806..37009749
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AA seq
651 aa
AA seq
DB search
MAQIQVQHQPPVTGPNGVAANAGGAPGQFVSTSLYVGDLDQNVTDSQLYDLFNQVGQVVS
VRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG
NIFIKNLDKAIDHKALHDTFSSFGNILSCKIATDGTGQSKGYGFVQFDSEEAAQSAIDKL
NGMLINDKPVFVGHFLRKQERDGAWNKTKFNNVYVKNISESTTEDDLKKIFGEHGQITSV
VVMRDGDGKSRCFGFVNFEDPDAAAKAVDNLNGKKFDEKEWYVGKAQKKYERELELKERF
EQSMKEASDKFQGVNLYIKNLDDSISDEKLKELFSEYGTVTSCKVMRDPDGNSRGSGFVA
FSTTEEASRALAEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSVAPRMP
MYPPGAPGLGQQFLYGQAPPSIIPPQAGFGYQQQLVPGIRPGGAPMPNFFVPMVQQGPQG
QRPGGRRGAGPVQQNQQPVPMMQQHMLPRGRVYRYPPGRNMQEVPFSGVPSGMLSVPYDM
GGIPMRDAAGGQGVPALATALANASTEQQRTMLGEALYPLVDQLEHESAAKVTGMLLEMD
QTEVLHLLESPEALKAKVAEAMEVLRNVAQQQANSSADQLSSLSLNDNLVS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattcaagttcagcatcagcctccggtgaccggaccgaacggcgtcgccgcc
aacgccggtggcgctccgggccagttcgtatcgacgtcgctgtacgttggggatctggac
cagaatgtgaccgactcgcagctttacgatctgttcaaccaggtcggccaggtcgtgtcg
gtgagggtctgcagagacctgagtactcgccgatctctcggctatggctacgtcaactat
agcaaccctcaagatgctgcgagggcactggatgttctgaacttcactcccctgaacaac
aaatccatcaggattatgtattctcaccgggaccctagtattagaaagagtggaaccgga
aatatatttatcaagaatctggacaaggcaattgaccacaaagcattgcatgatacattt
tcttctttcggaaatattctttcttgcaagatagccactgatggcactggccagtcgaag
ggctatggttttgtgcagtttgatagtgaagaagctgctcagagtgcaatagataagtta
aatggcatgctgattaatgataagccagtatttgtgggacactttcttcgcaagcaggag
agagatggcgcttggaataagacaaaattcaataatgtctatgtgaaaaatatatcagaa
tctacaacagaagatgatttgaagaaaatttttggtgagcatggacaaattaccagtgtt
gtagtgatgagggatggggatggcaagtcaaggtgttttggttttgtcaactttgaggat
ccagatgcagctgcgaaggctgttgacaatctgaatggaaagaaattcgatgaaaaggag
tggtatgttgggaaagcccagaaaaagtatgagagagaacttgaattgaaggagagattt
gagcagagtatgaaggaagctagtgataaatttcaaggtgtcaatttgtatatcaaaaac
ttggacgatagcattagtgatgaaaaactgaaggaattattctcagagtatggtacagtt
acttcatgcaaggttatgcgggatcctgatggaaatagtagaggttctggttttgttgcc
ttttcaactactgaagaagcatctcgagctcttgctgagatgaatggcaaaatggttgtt
agcaaacctctgtatgttgcacttgcccaaaggaaagaagagagaagagcaagattgcag
gctcagttttctcaaatgaggccagttgcaatggcaccttcagtggctcctcgtatgcca
atgtaccctcctggtgctccaggtctaggacaacaatttttgtatgggcaggcacctcca
tcgataattcctccacaagctggatttggttaccaacagcaacttgtgcctggaataagg
cctggtggtgctccaatgccaaacttctttgttccaatggtccagcagggtcctcagggc
caacgcccaggaggtcgacgtggggcaggtcctgtgcaacaaaaccagcagccagtccca
atgatgcagcagcatatgcttcctaggggacgcgtgtatcgctatccacctggtcgcaac
atgcaggaagttccattttcgggagttcccagtggtatgctttcagtaccatatgacatg
ggtggcatcccaatgcgagatgccgcaggagggcagggtgttccagccttggccacagcc
cttgcaaatgcttcaactgagcagcaaaggacgatgcttggtgaggctttatatccccta
gttgaccagttggagcacgagtcagcagctaaggtgacaggcatgcttttggagatggac
cagactgaagttttgcatttgctcgagtcgccggaggctttgaaggccaaagtggcagag
gccatggaggtcctgagaaatgttgcccaacagcaggctaacagcagcgctgatcaacta
tcttcattgtctctgaatgacaaccttgtctcgtaa
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