KEGG   Prunus persica (peach): 18790720
Entry
18790720          CDS       T03092                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
pper  Prunus persica (peach)
Pathway
pper03030  DNA replication
pper03410  Base excision repair
pper03420  Nucleotide excision repair
pper03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    18790720
   03410 Base excision repair
    18790720
   03420 Nucleotide excision repair
    18790720
   03430 Mismatch repair
    18790720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pper03032]
    18790720
   03036 Chromosome and associated proteins [BR:pper03036]
    18790720
   03400 DNA repair and recombination proteins [BR:pper03400]
    18790720
DNA replication proteins [BR:pper03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    18790720
  DNA Replication Termination Factors
   ELG1-RFC complex
    18790720
Chromosome and associated proteins [BR:pper03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    18790720
DNA repair and recombination proteins [BR:pper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     18790720
  Check point factors
   HRAD17(Rad24)-RFC complex
    18790720
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 Mg_chelatase DUF815 RsgA_GTPase ABC_tran RuvB_N AAA_22 AAA_29 AAA_23 AAA_5 AAA_2 AAA_24 AAA_16 T2SSE SprT-like TsaE
Other DBs
NCBI-GeneID: 18790720
NCBI-ProteinID: XP_007222214
UniProt: M5XPG3
LinkDB
Position
G1:18417879..18424343
AA seq 354 aa
MLWVDKYRPKTLDQAMVHQDIAQNLKKLVAEQDCPHLLFYGPSGSGKKTLIIALLRQIFG
PSADKVKVENRTWKVDAGSRTIDIELTTLSSTNHIELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKILVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTEEQIVKVLEFIGKKEGLQLPSGFPARIAEKSNRSLRRAILSFETCHVQQY
PFTSNQAIPPMDWEEYVSEIASDIMKEQSPKRLYQVRQKLYELLLNCIPPEIILKRLLFE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIAAFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgctgtgggtggacaagtacagacccaaaaccctagaccaggcgatggtccaccaagac
atcgctcaaaacctcaagaaactcgttgcagagcaggattgcccccatttgctcttttac
ggcccttctggctctggcaagaaaaccctaatcatcgcccttcttcgacagattttcggt
cccagcgccgataaggtgaaggtggaaaataggacatggaaagttgatgctggaagtaga
accattgatatagagctgactacattatcaagcacaaaccatattgaactgaaccccagt
gatgcaggttttcaggacagatatattgttcaagagataattaaagaaatggctaaaaat
agacccattgacacaaaagggaaaaagggatataaaatcttagtgctgaatgaagtcgac
aaactttctagagaagctcagcattctcttcgaagaactatggagaagtatagtgcttat
tgccggctaatactatgctgtaacagttcttcaaaggttactgaagcaatccggtcccgg
tgtctaaatgtgcgaataaatgcgccaacagaagagcagattgttaaggtattggagttc
attggaaagaaggaagggctgcaacttccttctggatttcctgctcgtatagcggaaaaa
tcaaataggagcttaaggagagctatattgtcattcgaaacttgtcatgttcaacagtat
ccctttacaagtaatcaagcaatacccccaatggactgggaggaatatgtttctgaaatt
gcatctgatataatgaaggagcagagcccaaaaaggctttaccaggtgcggcaaaagttg
tatgagctacttcttaattgtattcctccagagatcatcttgaagaggctgctttttgaa
ttattgaagaaattggatgctgagttgaagcatgaggtctgccattgggctgcatactac
gaacacaggatgcgtcttgggcagaaagccatatttcacctcgaagcgttcgtggccaag
ttcatgagcatctataaggctttcctcattgcagcttttggctga

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